Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 DUX4L8-201ENST00000629013 1275 ntBASIC28.29■■■□□ 2.12
CNKSR1Q969H4 DUX4L3-201ENST00000630187 1275 ntBASIC28.29■■■□□ 2.12
CNKSR1Q969H4 DUX4L7-201ENST00000630678 1275 ntBASIC28.29■■■□□ 2.12
CNKSR1Q969H4 DUX4L5-201ENST00000630834 1275 ntBASIC28.29■■■□□ 2.12
CNKSR1Q969H4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CNKSR1Q969H4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.29■■■□□ 2.12
CNKSR1Q969H4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.28■■■□□ 2.12
CNKSR1Q969H4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
CNKSR1Q969H4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.26■■■□□ 2.12
CNKSR1Q969H4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.26■■■□□ 2.11
CNKSR1Q969H4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CNKSR1Q969H4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.26■■■□□ 2.11
CNKSR1Q969H4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.26■■■□□ 2.11
CNKSR1Q969H4 TSPY26P-201ENST00000476365 1326 ntBASIC28.25■■■□□ 2.11
CNKSR1Q969H4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CNKSR1Q969H4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CNKSR1Q969H4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CNKSR1Q969H4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CNKSR1Q969H4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CNKSR1Q969H4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.24■■■□□ 2.11
CNKSR1Q969H4 AL358852.1-201ENST00000623174 1268 ntBASIC28.24■■■□□ 2.11
CNKSR1Q969H4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.24■■■□□ 2.11
CNKSR1Q969H4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.23■■■□□ 2.11
CNKSR1Q969H4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
CNKSR1Q969H4 AC027612.3-201ENST00000413684 1047 ntBASIC28.23■■■□□ 2.11
CNKSR1Q969H4 AC123595.1-201ENST00000440769 1046 ntBASIC28.23■■■□□ 2.11
CNKSR1Q969H4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.23■■■□□ 2.11
CNKSR1Q969H4 pRNA.6-201ENST00000610482 90 ntBASIC28.23■■■□□ 2.11
CNKSR1Q969H4 pRNA.5-201ENST00000612139 90 ntBASIC28.23■■■□□ 2.11
CNKSR1Q969H4 pRNA.11-201ENST00000618423 90 ntBASIC28.23■■■□□ 2.11
CNKSR1Q969H4 pRNA.13-201ENST00000619112 90 ntBASIC28.23■■■□□ 2.11
CNKSR1Q969H4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CNKSR1Q969H4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CNKSR1Q969H4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CNKSR1Q969H4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 MIR6089-201ENST00000616698 64 ntBASIC28.21■■■□□ 2.11
CNKSR1Q969H4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
CNKSR1Q969H4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CNKSR1Q969H4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.2■■■□□ 2.11
CNKSR1Q969H4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
CNKSR1Q969H4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.2■■■□□ 2.1
CNKSR1Q969H4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CNKSR1Q969H4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CNKSR1Q969H4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.2■■■□□ 2.1
CNKSR1Q969H4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 AC004911.1-201ENST00000416316 871 ntBASIC28.19■■■□□ 2.1
CNKSR1Q969H4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CNKSR1Q969H4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CNKSR1Q969H4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.18■■■□□ 2.1
CNKSR1Q969H4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 365.6 ms