Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
SMARCC1Q92922 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.5■■■□□ 2.31
SMARCC1Q92922 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.49■■■□□ 2.31
SMARCC1Q92922 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC29.49■■■□□ 2.31
SMARCC1Q92922 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
SMARCC1Q92922 KRT18P5-201ENST00000436075 1291 ntBASIC29.49■■■□□ 2.31
SMARCC1Q92922 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.49■■■□□ 2.31
SMARCC1Q92922 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.49■■■□□ 2.31
SMARCC1Q92922 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.49■■■□□ 2.31
SMARCC1Q92922 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SMARCC1Q92922 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.49■■■□□ 2.31
SMARCC1Q92922 AC126544.1-201ENST00000580842 1059 ntBASIC29.49■■■□□ 2.31
SMARCC1Q92922 AC092803.2-201ENST00000564287 1899 ntBASIC29.48■■■□□ 2.31
SMARCC1Q92922 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.48■■■□□ 2.31
SMARCC1Q92922 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SMARCC1Q92922 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC29.48■■■□□ 2.31
SMARCC1Q92922 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
SMARCC1Q92922 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.48■■■□□ 2.31
SMARCC1Q92922 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
SMARCC1Q92922 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
SMARCC1Q92922 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.47■■■□□ 2.31
SMARCC1Q92922 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SMARCC1Q92922 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
SMARCC1Q92922 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SMARCC1Q92922 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.47■■■□□ 2.31
SMARCC1Q92922 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SMARCC1Q92922 AL137784.2-201ENST00000607332 1000 ntBASIC29.47■■■□□ 2.31
SMARCC1Q92922 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
SMARCC1Q92922 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.46■■■□□ 2.31
SMARCC1Q92922 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
SMARCC1Q92922 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.46■■■□□ 2.31
SMARCC1Q92922 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SMARCC1Q92922 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
SMARCC1Q92922 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
SMARCC1Q92922 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
SMARCC1Q92922 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.45■■■□□ 2.31
SMARCC1Q92922 AL031602.1-201ENST00000633169 911 ntBASIC29.45■■■□□ 2.31
SMARCC1Q92922 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
SMARCC1Q92922 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SMARCC1Q92922 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC1Q92922 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC1Q92922 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC1Q92922 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC1Q92922 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 pRNA.6-201ENST00000610482 90 ntBASIC29.44■■■□□ 2.3
SMARCC1Q92922 pRNA.5-201ENST00000612139 90 ntBASIC29.44■■■□□ 2.3
SMARCC1Q92922 pRNA.11-201ENST00000618423 90 ntBASIC29.44■■■□□ 2.3
SMARCC1Q92922 pRNA.13-201ENST00000619112 90 ntBASIC29.44■■■□□ 2.3
SMARCC1Q92922 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC1Q92922 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC1Q92922 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.44■■■□□ 2.3
SMARCC1Q92922 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMARCC1Q92922 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
SMARCC1Q92922 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMARCC1Q92922 SLC47A1P1-202ENST00000449666 945 ntBASIC29.43■■■□□ 2.3
SMARCC1Q92922 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
SMARCC1Q92922 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.43■■■□□ 2.3
SMARCC1Q92922 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.43■■■□□ 2.3
SMARCC1Q92922 TSPY26P-201ENST00000476365 1326 ntBASIC29.43■■■□□ 2.3
SMARCC1Q92922 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCC1Q92922 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCC1Q92922 DUX4L2-201ENST00000561772 1275 ntBASIC29.42■■■□□ 2.3
SMARCC1Q92922 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
SMARCC1Q92922 RAB43-208ENST00000615093 783 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCC1Q92922 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC29.42■■■□□ 2.3
SMARCC1Q92922 DUX4L6-201ENST00000626483 1275 ntBASIC29.42■■■□□ 2.3
SMARCC1Q92922 DUX4L1-201ENST00000627662 1275 ntBASIC29.42■■■□□ 2.3
SMARCC1Q92922 DUX4L8-201ENST00000629013 1275 ntBASIC29.42■■■□□ 2.3
SMARCC1Q92922 DUX4L3-201ENST00000630187 1275 ntBASIC29.42■■■□□ 2.3
SMARCC1Q92922 DUX4L7-201ENST00000630678 1275 ntBASIC29.42■■■□□ 2.3
SMARCC1Q92922 DUX4L5-201ENST00000630834 1275 ntBASIC29.42■■■□□ 2.3
SMARCC1Q92922 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.42■■■□□ 2.3
SMARCC1Q92922 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCC1Q92922 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCC1Q92922 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCC1Q92922 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCC1Q92922 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCC1Q92922 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
SMARCC1Q92922 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCC1Q92922 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCC1Q92922 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.41■■■□□ 2.3
SMARCC1Q92922 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC29.41■■■□□ 2.3
SMARCC1Q92922 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.41■■■□□ 2.3
SMARCC1Q92922 AL358852.1-201ENST00000623174 1268 ntBASIC29.41■■■□□ 2.3
SMARCC1Q92922 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
SMARCC1Q92922 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCC1Q92922 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCC1Q92922 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
SMARCC1Q92922 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
SMARCC1Q92922 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.4■■■□□ 2.3
SMARCC1Q92922 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCC1Q92922 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCC1Q92922 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms