Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC024257.2-201ENST00000549699 147 ntBASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.72■■□□□ 1.39
SH3RF2Q8TEC5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF2Q8TEC5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.71■■□□□ 1.39
SH3RF2Q8TEC5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF2Q8TEC5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SH3RF2Q8TEC5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF2Q8TEC5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.71■■□□□ 1.39
SH3RF2Q8TEC5 AC142381.2-201ENST00000566120 298 ntBASIC23.71■■□□□ 1.39
SH3RF2Q8TEC5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF2Q8TEC5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.7■■□□□ 1.39
SH3RF2Q8TEC5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SH3RF2Q8TEC5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SH3RF2Q8TEC5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SH3RF2Q8TEC5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SH3RF2Q8TEC5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH3RF2Q8TEC5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SH3RF2Q8TEC5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.7■■□□□ 1.38
SH3RF2Q8TEC5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.7■■□□□ 1.38
SH3RF2Q8TEC5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF2Q8TEC5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
SH3RF2Q8TEC5 AL031432.3-201ENST00000607698 485 ntBASIC23.69■■□□□ 1.38
SH3RF2Q8TEC5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF2Q8TEC5 AC009102.2-201ENST00000606772 1639 ntBASIC23.69■■□□□ 1.38
SH3RF2Q8TEC5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.69■■□□□ 1.38
SH3RF2Q8TEC5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF2Q8TEC5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF2Q8TEC5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 DUX4L19-201ENST00000557448 1267 ntBASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 AC022211.4-201ENST00000625094 2161 ntBASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF2Q8TEC5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF2Q8TEC5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF2Q8TEC5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF2Q8TEC5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.66■■□□□ 1.38
SH3RF2Q8TEC5 SUDS3P1-201ENST00000505831 966 ntBASIC23.66■■□□□ 1.38
SH3RF2Q8TEC5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.66■■□□□ 1.38
SH3RF2Q8TEC5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3RF2Q8TEC5 AL161729.1-201ENST00000604104 1402 ntBASIC23.66■■□□□ 1.38
SH3RF2Q8TEC5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 EDA-201ENST00000338901 1233 ntBASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 AC099791.2-201ENST00000605725 427 ntBASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 AC092171.4-201ENST00000609130 632 ntBASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 SYT6-210ENST00000641643 1587 ntBASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3RF2Q8TEC5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3RF2Q8TEC5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3RF2Q8TEC5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3RF2Q8TEC5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3RF2Q8TEC5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3RF2Q8TEC5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
SH3RF2Q8TEC5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SH3RF2Q8TEC5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SH3RF2Q8TEC5 AL355001.2-201ENST00000620617 1191 ntBASIC23.64■■□□□ 1.37
SH3RF2Q8TEC5 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.64■■□□□ 1.37
SH3RF2Q8TEC5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SH3RF2Q8TEC5 AC138932.3-201ENST00000567634 1902 ntBASIC23.64■■□□□ 1.37
SH3RF2Q8TEC5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SH3RF2Q8TEC5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.63■■□□□ 1.37
SH3RF2Q8TEC5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SH3RF2Q8TEC5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SH3RF2Q8TEC5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SH3RF2Q8TEC5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3RF2Q8TEC5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3RF2Q8TEC5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SH3RF2Q8TEC5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SH3RF2Q8TEC5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SH3RF2Q8TEC5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
SH3RF2Q8TEC5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SH3RF2Q8TEC5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SH3RF2Q8TEC5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.62■■□□□ 1.37
SH3RF2Q8TEC5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SH3RF2Q8TEC5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SH3RF2Q8TEC5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.61■■□□□ 1.37
SH3RF2Q8TEC5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3RF2Q8TEC5 ZNRF2P3-201ENST00000424200 374 ntBASIC23.61■■□□□ 1.37
SH3RF2Q8TEC5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH3RF2Q8TEC5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms