Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK4Q8NE63 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 AC093536.1-201ENST00000569153 554 ntBASIC21.98■■□□□ 1.11
HIPK4Q8NE63 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.98■■□□□ 1.11
HIPK4Q8NE63 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK4Q8NE63 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK4Q8NE63 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
HIPK4Q8NE63 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.97■■□□□ 1.11
HIPK4Q8NE63 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK4Q8NE63 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.97■■□□□ 1.11
HIPK4Q8NE63 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK4Q8NE63 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
HIPK4Q8NE63 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK4Q8NE63 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
HIPK4Q8NE63 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.96■■□□□ 1.11
HIPK4Q8NE63 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK4Q8NE63 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK4Q8NE63 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK4Q8NE63 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK4Q8NE63 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
HIPK4Q8NE63 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
HIPK4Q8NE63 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK4Q8NE63 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 AC007375.3-201ENST00000600936 2314 ntBASIC21.94■■□□□ 1.1
HIPK4Q8NE63 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
HIPK4Q8NE63 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.94■■□□□ 1.1
HIPK4Q8NE63 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK4Q8NE63 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK4Q8NE63 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HIPK4Q8NE63 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
HIPK4Q8NE63 LINC00526-201ENST00000581067 1875 ntBASIC21.93■■□□□ 1.1
HIPK4Q8NE63 AC007029.1-201ENST00000604183 313 ntBASIC21.93■■□□□ 1.1
HIPK4Q8NE63 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
HIPK4Q8NE63 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK4Q8NE63 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK4Q8NE63 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 GUSBP5-202ENST00000510805 1989 ntBASIC21.92■■□□□ 1.1
HIPK4Q8NE63 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 ANOS2P-203ENST00000472227 1816 ntBASIC21.92■■□□□ 1.1
HIPK4Q8NE63 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.92■■□□□ 1.1
HIPK4Q8NE63 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 AL024507.2-201ENST00000606070 2574 ntBASIC21.91■■□□□ 1.1
HIPK4Q8NE63 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms