Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AC133561.4-201ENST00000566112 224 ntBASIC24.08■■□□□ 1.45
TTC9BQ8N6N2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.08■■□□□ 1.45
TTC9BQ8N6N2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TTC9BQ8N6N2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
TTC9BQ8N6N2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
TTC9BQ8N6N2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 AL031432.3-201ENST00000607698 485 ntBASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 AC142381.3-201ENST00000568208 1670 ntBASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 AC135279.3-201ENST00000610945 1311 ntBASIC24.07■■□□□ 1.44
TTC9BQ8N6N2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC9BQ8N6N2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC9BQ8N6N2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.06■■□□□ 1.44
TTC9BQ8N6N2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.06■■□□□ 1.44
TTC9BQ8N6N2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TTC9BQ8N6N2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC9BQ8N6N2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC9BQ8N6N2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.06■■□□□ 1.44
TTC9BQ8N6N2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TTC9BQ8N6N2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TTC9BQ8N6N2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
TTC9BQ8N6N2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC9BQ8N6N2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC9BQ8N6N2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.05■■□□□ 1.44
TTC9BQ8N6N2 AC099791.2-201ENST00000605725 427 ntBASIC24.05■■□□□ 1.44
TTC9BQ8N6N2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TTC9BQ8N6N2 AL161729.1-201ENST00000604104 1402 ntBASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 ALDH1A3-203ENST00000557963 1670 ntBASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC9BQ8N6N2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 C17orf82-201ENST00000623772 1530 ntBASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.02■■□□□ 1.44
TTC9BQ8N6N2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC9BQ8N6N2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TTC9BQ8N6N2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
TTC9BQ8N6N2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC9BQ8N6N2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TTC9BQ8N6N2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC9BQ8N6N2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC9BQ8N6N2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24■■□□□ 1.43
TTC9BQ8N6N2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
TTC9BQ8N6N2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24■■□□□ 1.43
TTC9BQ8N6N2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24■■□□□ 1.43
TTC9BQ8N6N2 SERBP1P1-201ENST00000396021 1160 ntBASIC24■■□□□ 1.43
TTC9BQ8N6N2 SUDS3P1-201ENST00000505831 966 ntBASIC24■■□□□ 1.43
TTC9BQ8N6N2 AC142381.2-201ENST00000566120 298 ntBASIC24■■□□□ 1.43
TTC9BQ8N6N2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TTC9BQ8N6N2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TTC9BQ8N6N2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24■■□□□ 1.43
TTC9BQ8N6N2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC9BQ8N6N2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC9BQ8N6N2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.99■■□□□ 1.43
TTC9BQ8N6N2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TTC9BQ8N6N2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
TTC9BQ8N6N2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC9BQ8N6N2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 AC006455.2-201ENST00000429931 906 ntBASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 SYT6-210ENST00000641643 1587 ntBASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
TTC9BQ8N6N2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC9BQ8N6N2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC9BQ8N6N2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms