Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATPAF2Q8N5M1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 TSPY9P-201ENST00000440215 945 ntBASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 TSPY11P-201ENST00000442607 1045 ntBASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATPAF2Q8N5M1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ATPAF2Q8N5M1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATPAF2Q8N5M1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATPAF2Q8N5M1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.33■■□□□ 1.33
ATPAF2Q8N5M1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATPAF2Q8N5M1 MTDHP2-201ENST00000601468 714 ntBASIC23.33■■□□□ 1.33
ATPAF2Q8N5M1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.33■■□□□ 1.33
ATPAF2Q8N5M1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATPAF2Q8N5M1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ATPAF2Q8N5M1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.33■■□□□ 1.32
ATPAF2Q8N5M1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
ATPAF2Q8N5M1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 MIR6722-201ENST00000617286 78 ntBASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATPAF2Q8N5M1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
ATPAF2Q8N5M1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.3■■□□□ 1.32
ATPAF2Q8N5M1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATPAF2Q8N5M1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATPAF2Q8N5M1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.3■■□□□ 1.32
ATPAF2Q8N5M1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATPAF2Q8N5M1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATPAF2Q8N5M1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.3■■□□□ 1.32
ATPAF2Q8N5M1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATPAF2Q8N5M1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.29■■□□□ 1.32
ATPAF2Q8N5M1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATPAF2Q8N5M1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
ATPAF2Q8N5M1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.29■■□□□ 1.32
ATPAF2Q8N5M1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
ATPAF2Q8N5M1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATPAF2Q8N5M1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
ATPAF2Q8N5M1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATPAF2Q8N5M1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATPAF2Q8N5M1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATPAF2Q8N5M1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATPAF2Q8N5M1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ATPAF2Q8N5M1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATPAF2Q8N5M1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 AC010997.5-201ENST00000609182 354 ntBASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.27■■□□□ 1.32
ATPAF2Q8N5M1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATPAF2Q8N5M1 GUSBP5-201ENST00000418136 578 ntBASIC23.26■■□□□ 1.31
ATPAF2Q8N5M1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms