Protein–RNA interactions for Protein: Q8N4C6

NIN, Ninein, humanhuman

Predictions only

Length 2,090 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINQ8N4C6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
NINQ8N4C6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.34■■□□□ 1.01
NINQ8N4C6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NINQ8N4C6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NINQ8N4C6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NINQ8N4C6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
NINQ8N4C6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
NINQ8N4C6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
NINQ8N4C6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.33■■□□□ 1.01
NINQ8N4C6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
NINQ8N4C6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NINQ8N4C6 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.33■■□□□ 1
NINQ8N4C6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.33■■□□□ 1
NINQ8N4C6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NINQ8N4C6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
NINQ8N4C6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.32■■□□□ 1
NINQ8N4C6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.32■■□□□ 1
NINQ8N4C6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NINQ8N4C6 AC131212.1-201ENST00000613771 668 ntBASIC21.32■■□□□ 1
NINQ8N4C6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NINQ8N4C6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.32■■□□□ 1
NINQ8N4C6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.32■■□□□ 1
NINQ8N4C6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NINQ8N4C6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
NINQ8N4C6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.32■■□□□ 1
NINQ8N4C6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.32■■□□□ 1
NINQ8N4C6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.32■■□□□ 1
NINQ8N4C6 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.32■■□□□ 1
NINQ8N4C6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.32■■□□□ 1
NINQ8N4C6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.32■■□□□ 1
NINQ8N4C6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.31■■□□□ 1
NINQ8N4C6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.31■■□□□ 1
NINQ8N4C6 AC090877.2-201ENST00000558441 1738 ntBASIC21.31■■□□□ 1
NINQ8N4C6 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.31■■□□□ 1
NINQ8N4C6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NINQ8N4C6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.31■■□□□ 1
NINQ8N4C6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.3■■□□□ 1
NINQ8N4C6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.3■■□□□ 1
NINQ8N4C6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.3■■□□□ 1
NINQ8N4C6 AC012676.1-201ENST00000574705 1949 ntBASIC21.3■■□□□ 1
NINQ8N4C6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NINQ8N4C6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NINQ8N4C6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.3■■□□□ 1
NINQ8N4C6 AC021242.3-201ENST00000607598 1377 ntBASIC21.3■■□□□ 1
NINQ8N4C6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.3■■□□□ 1
NINQ8N4C6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.3■■□□□ 1
NINQ8N4C6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.3■■□□□ 1
NINQ8N4C6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
NINQ8N4C6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NINQ8N4C6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NINQ8N4C6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NINQ8N4C6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.29■■□□□ 1
NINQ8N4C6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NINQ8N4C6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.29■■□□□ 1
NINQ8N4C6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NINQ8N4C6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.28■■□□□ 1
NINQ8N4C6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NINQ8N4C6 AC092028.1-203ENST00000608262 953 ntBASIC21.28■■□□□ 1
NINQ8N4C6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.28■■□□□ 1
NINQ8N4C6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NINQ8N4C6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.28■■□□□ 1
NINQ8N4C6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NINQ8N4C6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NINQ8N4C6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINQ8N4C6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.28■■□□□ 1
NINQ8N4C6 UNC93B8-201ENST00000511903 705 ntBASIC21.28■■□□□ 1
NINQ8N4C6 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.28■■□□□ 1
NINQ8N4C6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.28■■□□□ 1
NINQ8N4C6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.28■■□□□ 1
NINQ8N4C6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
NINQ8N4C6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NINQ8N4C6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.28■■□□□ 1
NINQ8N4C6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NINQ8N4C6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.27■■□□□ 1
NINQ8N4C6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.27■■□□□ 1
NINQ8N4C6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINQ8N4C6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINQ8N4C6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.27■■□□□ 1
NINQ8N4C6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINQ8N4C6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINQ8N4C6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
NINQ8N4C6 KRT16P3-201ENST00000439127 1283 ntBASIC21.27■□□□□ 0.99
NINQ8N4C6 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.27■□□□□ 0.99
NINQ8N4C6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NINQ8N4C6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NINQ8N4C6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
NINQ8N4C6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NINQ8N4C6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINQ8N4C6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.26■□□□□ 0.99
NINQ8N4C6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NINQ8N4C6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.26■□□□□ 0.99
NINQ8N4C6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINQ8N4C6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NINQ8N4C6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINQ8N4C6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.26■□□□□ 0.99
NINQ8N4C6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINQ8N4C6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINQ8N4C6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINQ8N4C6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINQ8N4C6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms