Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.85■■□□□ 1.41
SCML4Q8N228 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.85■■□□□ 1.41
SCML4Q8N228 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCML4Q8N228 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCML4Q8N228 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.84■■□□□ 1.41
SCML4Q8N228 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.84■■□□□ 1.41
SCML4Q8N228 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCML4Q8N228 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.84■■□□□ 1.41
SCML4Q8N228 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.84■■□□□ 1.41
SCML4Q8N228 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCML4Q8N228 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SCML4Q8N228 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCML4Q8N228 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.83■■□□□ 1.41
SCML4Q8N228 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.83■■□□□ 1.41
SCML4Q8N228 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCML4Q8N228 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCML4Q8N228 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCML4Q8N228 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCML4Q8N228 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.82■■□□□ 1.4
SCML4Q8N228 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.82■■□□□ 1.4
SCML4Q8N228 AL512631.2-201ENST00000604634 923 ntBASIC23.82■■□□□ 1.4
SCML4Q8N228 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCML4Q8N228 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCML4Q8N228 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.82■■□□□ 1.4
SCML4Q8N228 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCML4Q8N228 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCML4Q8N228 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
SCML4Q8N228 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SCML4Q8N228 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCML4Q8N228 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.81■■□□□ 1.4
SCML4Q8N228 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCML4Q8N228 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCML4Q8N228 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCML4Q8N228 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCML4Q8N228 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCML4Q8N228 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.8■■□□□ 1.4
SCML4Q8N228 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCML4Q8N228 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCML4Q8N228 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.8■■□□□ 1.4
SCML4Q8N228 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCML4Q8N228 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCML4Q8N228 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.8■■□□□ 1.4
SCML4Q8N228 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SCML4Q8N228 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCML4Q8N228 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCML4Q8N228 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCML4Q8N228 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCML4Q8N228 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.79■■□□□ 1.4
SCML4Q8N228 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCML4Q8N228 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCML4Q8N228 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCML4Q8N228 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCML4Q8N228 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCML4Q8N228 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
SCML4Q8N228 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCML4Q8N228 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCML4Q8N228 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCML4Q8N228 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.78■■□□□ 1.4
SCML4Q8N228 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCML4Q8N228 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCML4Q8N228 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.78■■□□□ 1.4
SCML4Q8N228 AC131281.2-201ENST00000520478 145 ntBASIC23.78■■□□□ 1.4
SCML4Q8N228 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.78■■□□□ 1.4
SCML4Q8N228 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SCML4Q8N228 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCML4Q8N228 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.77■■□□□ 1.4
SCML4Q8N228 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCML4Q8N228 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SCML4Q8N228 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.77■■□□□ 1.4
SCML4Q8N228 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.77■■□□□ 1.4
SCML4Q8N228 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.77■■□□□ 1.4
SCML4Q8N228 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCML4Q8N228 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCML4Q8N228 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.77■■□□□ 1.4
SCML4Q8N228 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCML4Q8N228 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.39
SCML4Q8N228 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML4Q8N228 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.76■■□□□ 1.39
SCML4Q8N228 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML4Q8N228 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML4Q8N228 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML4Q8N228 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML4Q8N228 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCML4Q8N228 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SCML4Q8N228 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.75■■□□□ 1.39
SCML4Q8N228 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SCML4Q8N228 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCML4Q8N228 AC009102.2-201ENST00000606772 1639 ntBASIC23.74■■□□□ 1.39
SCML4Q8N228 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCML4Q8N228 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCML4Q8N228 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.74■■□□□ 1.39
SCML4Q8N228 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms