Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT78Q8N1N4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
KRT78Q8N1N4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
KRT78Q8N1N4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT78Q8N1N4 AC009299.2-201ENST00000482477 511 ntBASIC21.93■■□□□ 1.1
KRT78Q8N1N4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.93■■□□□ 1.1
KRT78Q8N1N4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KRT78Q8N1N4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT78Q8N1N4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT78Q8N1N4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.91■■□□□ 1.1
KRT78Q8N1N4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
KRT78Q8N1N4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT78Q8N1N4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRT78Q8N1N4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
KRT78Q8N1N4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT78Q8N1N4 AC239859.2-201ENST00000444165 318 ntBASIC21.9■■□□□ 1.1
KRT78Q8N1N4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
KRT78Q8N1N4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT78Q8N1N4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT78Q8N1N4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT78Q8N1N4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT78Q8N1N4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.89■■□□□ 1.1
KRT78Q8N1N4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
KRT78Q8N1N4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
KRT78Q8N1N4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT78Q8N1N4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.89■■□□□ 1.09
KRT78Q8N1N4 MIR4787-201ENST00000607364 84 ntBASIC21.89■■□□□ 1.09
KRT78Q8N1N4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT78Q8N1N4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT78Q8N1N4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT78Q8N1N4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT78Q8N1N4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 AC092028.1-203ENST00000608262 953 ntBASIC21.88■■□□□ 1.09
KRT78Q8N1N4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT78Q8N1N4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT78Q8N1N4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 MIR6722-201ENST00000617286 78 ntBASIC21.86■■□□□ 1.09
KRT78Q8N1N4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT78Q8N1N4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT78Q8N1N4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms