Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC146Q8IYE0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC146Q8IYE0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.28■■■□□ 2.44
CCDC146Q8IYE0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC146Q8IYE0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC146Q8IYE0 MIR6722-201ENST00000617286 78 ntBASIC30.28■■■□□ 2.44
CCDC146Q8IYE0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
CCDC146Q8IYE0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC146Q8IYE0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.28■■■□□ 2.44
CCDC146Q8IYE0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC146Q8IYE0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC146Q8IYE0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.27■■■□□ 2.44
CCDC146Q8IYE0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.27■■■□□ 2.44
CCDC146Q8IYE0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC30.27■■■□□ 2.44
CCDC146Q8IYE0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC146Q8IYE0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC146Q8IYE0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC146Q8IYE0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC146Q8IYE0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC146Q8IYE0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC30.26■■■□□ 2.43
CCDC146Q8IYE0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC146Q8IYE0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC146Q8IYE0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.24■■■□□ 2.43
CCDC146Q8IYE0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
CCDC146Q8IYE0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
CCDC146Q8IYE0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC146Q8IYE0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CCDC146Q8IYE0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC30.24■■■□□ 2.43
CCDC146Q8IYE0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
CCDC146Q8IYE0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
CCDC146Q8IYE0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC146Q8IYE0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC30.23■■■□□ 2.43
CCDC146Q8IYE0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC146Q8IYE0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC146Q8IYE0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC146Q8IYE0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC146Q8IYE0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC146Q8IYE0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.21■■■□□ 2.43
CCDC146Q8IYE0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC146Q8IYE0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC146Q8IYE0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC146Q8IYE0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC146Q8IYE0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCDC146Q8IYE0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC146Q8IYE0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
CCDC146Q8IYE0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC30.19■■■□□ 2.42
CCDC146Q8IYE0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CCDC146Q8IYE0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.19■■■□□ 2.42
CCDC146Q8IYE0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
CCDC146Q8IYE0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC146Q8IYE0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CCDC146Q8IYE0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC146Q8IYE0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC146Q8IYE0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC146Q8IYE0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
CCDC146Q8IYE0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC146Q8IYE0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC146Q8IYE0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
CCDC146Q8IYE0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC146Q8IYE0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 MIR6724-1-201ENST00000616420 92 ntBASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 MIR6724-2-201ENST00000616483 92 ntBASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 MIR6724-4-201ENST00000617390 92 ntBASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 MIR6724-3-201ENST00000622482 92 ntBASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC146Q8IYE0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC146Q8IYE0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms