Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL161729.1-201ENST00000604104 1402 ntBASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 AC145676.1-201ENST00000514988 2004 ntBASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.69■■□□□ 1.54
NPAS4Q8IUM7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPAS4Q8IUM7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPAS4Q8IUM7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
NPAS4Q8IUM7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPAS4Q8IUM7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
NPAS4Q8IUM7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 MIR3181-201ENST00000578512 73 ntBASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NPAS4Q8IUM7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NPAS4Q8IUM7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NPAS4Q8IUM7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NPAS4Q8IUM7 BX842568.3-201ENST00000418104 571 ntBASIC24.66■■□□□ 1.54
NPAS4Q8IUM7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.66■■□□□ 1.54
NPAS4Q8IUM7 AC233992.3-201ENST00000607491 485 ntBASIC24.66■■□□□ 1.54
NPAS4Q8IUM7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NPAS4Q8IUM7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.65■■□□□ 1.54
NPAS4Q8IUM7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.65■■□□□ 1.54
NPAS4Q8IUM7 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.65■■□□□ 1.54
NPAS4Q8IUM7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 AL162430.1-201ENST00000480705 870 ntBASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.64■■□□□ 1.54
NPAS4Q8IUM7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.64■■□□□ 1.53
NPAS4Q8IUM7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
NPAS4Q8IUM7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NPAS4Q8IUM7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NPAS4Q8IUM7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NPAS4Q8IUM7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NPAS4Q8IUM7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.63■■□□□ 1.53
NPAS4Q8IUM7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
NPAS4Q8IUM7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
NPAS4Q8IUM7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
NPAS4Q8IUM7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NPAS4Q8IUM7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NPAS4Q8IUM7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.62■■□□□ 1.53
NPAS4Q8IUM7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NPAS4Q8IUM7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NPAS4Q8IUM7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NPAS4Q8IUM7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.62■■□□□ 1.53
NPAS4Q8IUM7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NPAS4Q8IUM7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NPAS4Q8IUM7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
NPAS4Q8IUM7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
NPAS4Q8IUM7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
NPAS4Q8IUM7 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.59■■□□□ 1.53
NPAS4Q8IUM7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.59■■□□□ 1.53
NPAS4Q8IUM7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
NPAS4Q8IUM7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
NPAS4Q8IUM7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
NPAS4Q8IUM7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms