Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
ABCA9Q8IUA7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC35.37■■■■□ 3.25
ABCA9Q8IUA7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC35.37■■■■□ 3.25
ABCA9Q8IUA7 AC010501.1-201ENST00000606270 1962 ntBASIC35.37■■■■□ 3.25
ABCA9Q8IUA7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC35.36■■■■□ 3.25
ABCA9Q8IUA7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC35.36■■■■□ 3.25
ABCA9Q8IUA7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
ABCA9Q8IUA7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC35.36■■■■□ 3.25
ABCA9Q8IUA7 AC142086.6-201ENST00000621154 1765 ntBASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC35.35■■■■□ 3.25
ABCA9Q8IUA7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
ABCA9Q8IUA7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC35.34■■■■□ 3.25
ABCA9Q8IUA7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC35.34■■■■□ 3.25
ABCA9Q8IUA7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC35.34■■■■□ 3.25
ABCA9Q8IUA7 MIR6089-201ENST00000616698 64 ntBASIC35.34■■■■□ 3.25
ABCA9Q8IUA7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
ABCA9Q8IUA7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC35.34■■■■□ 3.25
ABCA9Q8IUA7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC35.34■■■■□ 3.25
ABCA9Q8IUA7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
ABCA9Q8IUA7 HLA-L-209ENST00000420110 1011 ntBASIC35.33■■■■□ 3.25
ABCA9Q8IUA7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC35.33■■■■□ 3.25
ABCA9Q8IUA7 TERF1P2-201ENST00000583350 1212 ntBASIC35.33■■■■□ 3.25
ABCA9Q8IUA7 MIR6084-201ENST00000622012 110 ntBASIC35.33■■■■□ 3.25
ABCA9Q8IUA7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC35.33■■■■□ 3.25
ABCA9Q8IUA7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
ABCA9Q8IUA7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC35.32■■■■□ 3.25
ABCA9Q8IUA7 MIR572-201ENST00000384983 95 ntBASIC35.32■■■■□ 3.25
ABCA9Q8IUA7 KRT18P14-201ENST00000534205 1250 ntBASIC35.32■■■■□ 3.25
ABCA9Q8IUA7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC35.32■■■■□ 3.25
ABCA9Q8IUA7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.25
ABCA9Q8IUA7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
ABCA9Q8IUA7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
ABCA9Q8IUA7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
ABCA9Q8IUA7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC35.32■■■■□ 3.24
ABCA9Q8IUA7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
ABCA9Q8IUA7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
ABCA9Q8IUA7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC35.31■■■■□ 3.24
ABCA9Q8IUA7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
ABCA9Q8IUA7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA9Q8IUA7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
ABCA9Q8IUA7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA9Q8IUA7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA9Q8IUA7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
ABCA9Q8IUA7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC35.3■■■■□ 3.24
ABCA9Q8IUA7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC35.3■■■■□ 3.24
ABCA9Q8IUA7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC35.3■■■■□ 3.24
ABCA9Q8IUA7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
ABCA9Q8IUA7 AL354811.1-201ENST00000610286 706 ntBASIC35.3■■■■□ 3.24
ABCA9Q8IUA7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC35.29■■■■□ 3.24
ABCA9Q8IUA7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC35.29■■■■□ 3.24
ABCA9Q8IUA7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC35.29■■■■□ 3.24
ABCA9Q8IUA7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC35.29■■■■□ 3.24
ABCA9Q8IUA7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC35.29■■■■□ 3.24
ABCA9Q8IUA7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC35.29■■■■□ 3.24
ABCA9Q8IUA7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
ABCA9Q8IUA7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA9Q8IUA7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC35.27■■■■□ 3.24
ABCA9Q8IUA7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC35.27■■■■□ 3.24
ABCA9Q8IUA7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC35.27■■■■□ 3.24
ABCA9Q8IUA7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC35.27■■■■□ 3.24
ABCA9Q8IUA7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC35.26■■■■□ 3.24
ABCA9Q8IUA7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC35.26■■■■□ 3.24
ABCA9Q8IUA7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC35.26■■■■□ 3.24
ABCA9Q8IUA7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
ABCA9Q8IUA7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
ABCA9Q8IUA7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
ABCA9Q8IUA7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC35.25■■■■□ 3.23
ABCA9Q8IUA7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC35.25■■■■□ 3.23
ABCA9Q8IUA7 RAP2CP1-201ENST00000605103 478 ntBASIC35.24■■■■□ 3.23
ABCA9Q8IUA7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
ABCA9Q8IUA7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
ABCA9Q8IUA7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC35.24■■■■□ 3.23
ABCA9Q8IUA7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC35.24■■■■□ 3.23
ABCA9Q8IUA7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC35.24■■■■□ 3.23
ABCA9Q8IUA7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
ABCA9Q8IUA7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
ABCA9Q8IUA7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
ABCA9Q8IUA7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
ABCA9Q8IUA7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC35.23■■■■□ 3.23
ABCA9Q8IUA7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC35.23■■■■□ 3.23
ABCA9Q8IUA7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC35.23■■■■□ 3.23
ABCA9Q8IUA7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC35.22■■■■□ 3.23
ABCA9Q8IUA7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC35.21■■■■□ 3.23
ABCA9Q8IUA7 pRNA.6-201ENST00000610482 90 ntBASIC35.21■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms