Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.11■■■□□ 2.25
COL23A1Q86Y22 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.11■■■□□ 2.25
COL23A1Q86Y22 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
COL23A1Q86Y22 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL23A1Q86Y22 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL23A1Q86Y22 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.11■■■□□ 2.25
COL23A1Q86Y22 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
COL23A1Q86Y22 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL23A1Q86Y22 ME3-201ENST00000323418 1068 ntTSL 5 BASIC29.1■■■□□ 2.25
COL23A1Q86Y22 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC29.1■■■□□ 2.25
COL23A1Q86Y22 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL23A1Q86Y22 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL23A1Q86Y22 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.1■■■□□ 2.25
COL23A1Q86Y22 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
COL23A1Q86Y22 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
COL23A1Q86Y22 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
COL23A1Q86Y22 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
COL23A1Q86Y22 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
COL23A1Q86Y22 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
COL23A1Q86Y22 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
COL23A1Q86Y22 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.07■■■□□ 2.24
COL23A1Q86Y22 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
COL23A1Q86Y22 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
COL23A1Q86Y22 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.07■■■□□ 2.24
COL23A1Q86Y22 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.06■■■□□ 2.24
COL23A1Q86Y22 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
COL23A1Q86Y22 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC29.06■■■□□ 2.24
COL23A1Q86Y22 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.06■■■□□ 2.24
COL23A1Q86Y22 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.06■■■□□ 2.24
COL23A1Q86Y22 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
COL23A1Q86Y22 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.05■■■□□ 2.24
COL23A1Q86Y22 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.05■■■□□ 2.24
COL23A1Q86Y22 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC29.05■■■□□ 2.24
COL23A1Q86Y22 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC29.05■■■□□ 2.24
COL23A1Q86Y22 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.05■■■□□ 2.24
COL23A1Q86Y22 AC012414.1-201ENST00000556676 535 ntBASIC29.05■■■□□ 2.24
COL23A1Q86Y22 pRNA.6-201ENST00000610482 90 ntBASIC29.05■■■□□ 2.24
COL23A1Q86Y22 pRNA.5-201ENST00000612139 90 ntBASIC29.05■■■□□ 2.24
COL23A1Q86Y22 pRNA.11-201ENST00000618423 90 ntBASIC29.05■■■□□ 2.24
COL23A1Q86Y22 pRNA.13-201ENST00000619112 90 ntBASIC29.05■■■□□ 2.24
COL23A1Q86Y22 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
COL23A1Q86Y22 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.04■■■□□ 2.24
COL23A1Q86Y22 MIR572-201ENST00000384983 95 ntBASIC29.04■■■□□ 2.24
COL23A1Q86Y22 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.04■■■□□ 2.24
COL23A1Q86Y22 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.04■■■□□ 2.24
COL23A1Q86Y22 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
COL23A1Q86Y22 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.03■■■□□ 2.24
COL23A1Q86Y22 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
COL23A1Q86Y22 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.03■■■□□ 2.24
COL23A1Q86Y22 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL23A1Q86Y22 KRT18P14-201ENST00000534205 1250 ntBASIC29.03■■■□□ 2.24
COL23A1Q86Y22 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.03■■■□□ 2.24
COL23A1Q86Y22 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL23A1Q86Y22 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
COL23A1Q86Y22 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
COL23A1Q86Y22 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.02■■■□□ 2.24
COL23A1Q86Y22 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.02■■■□□ 2.24
COL23A1Q86Y22 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC29.02■■■□□ 2.24
COL23A1Q86Y22 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.02■■■□□ 2.24
COL23A1Q86Y22 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
COL23A1Q86Y22 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
COL23A1Q86Y22 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.01■■■□□ 2.24
COL23A1Q86Y22 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.01■■■□□ 2.23
COL23A1Q86Y22 TK2-208ENST00000545043 1120 ntTSL 2 BASIC29.01■■■□□ 2.23
COL23A1Q86Y22 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.01■■■□□ 2.23
COL23A1Q86Y22 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
COL23A1Q86Y22 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC29■■■□□ 2.23
COL23A1Q86Y22 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29■■■□□ 2.23
COL23A1Q86Y22 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC29■■■□□ 2.23
COL23A1Q86Y22 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29■■■□□ 2.23
COL23A1Q86Y22 IGHV3-19-201ENST00000521488 291 ntBASIC29■■■□□ 2.23
COL23A1Q86Y22 TERF1P2-201ENST00000583350 1212 ntBASIC29■■■□□ 2.23
COL23A1Q86Y22 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29■■■□□ 2.23
COL23A1Q86Y22 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC29■■■□□ 2.23
COL23A1Q86Y22 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
COL23A1Q86Y22 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
COL23A1Q86Y22 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.99■■■□□ 2.23
COL23A1Q86Y22 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
COL23A1Q86Y22 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.99■■■□□ 2.23
COL23A1Q86Y22 AL354811.1-201ENST00000610286 706 ntBASIC28.99■■■□□ 2.23
COL23A1Q86Y22 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.99■■■□□ 2.23
COL23A1Q86Y22 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
COL23A1Q86Y22 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
COL23A1Q86Y22 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
COL23A1Q86Y22 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
COL23A1Q86Y22 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
COL23A1Q86Y22 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
COL23A1Q86Y22 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
COL23A1Q86Y22 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms