Protein–RNA interactions for Protein: Q86XS8

RNF130, E3 ubiquitin-protein ligase RNF130, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130Q86XS8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF130Q86XS8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF130Q86XS8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.4■■□□□ 1.02
RNF130Q86XS8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF130Q86XS8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF130Q86XS8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF130Q86XS8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF130Q86XS8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF130Q86XS8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF130Q86XS8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
RNF130Q86XS8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF130Q86XS8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.02
RNF130Q86XS8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF130Q86XS8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF130Q86XS8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF130Q86XS8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RNF130Q86XS8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF130Q86XS8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF130Q86XS8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF130Q86XS8 AC120024.1-201ENST00000562672 995 ntBASIC21.39■■□□□ 1.01
RNF130Q86XS8 PVT1_1.1-201ENST00000615125 194 ntBASIC21.39■■□□□ 1.01
RNF130Q86XS8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF130Q86XS8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF130Q86XS8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RNF130Q86XS8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF130Q86XS8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF130Q86XS8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RNF130Q86XS8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF130Q86XS8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF130Q86XS8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF130Q86XS8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF130Q86XS8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF130Q86XS8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF130Q86XS8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF130Q86XS8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
RNF130Q86XS8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RNF130Q86XS8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF130Q86XS8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RNF130Q86XS8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF130Q86XS8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF130Q86XS8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF130Q86XS8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF130Q86XS8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF130Q86XS8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF130Q86XS8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF130Q86XS8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RNF130Q86XS8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF130Q86XS8 TSPY13P-201ENST00000338964 914 ntBASIC21.36■■□□□ 1.01
RNF130Q86XS8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF130Q86XS8 AC010980.1-201ENST00000587192 1142 ntBASIC21.36■■□□□ 1.01
RNF130Q86XS8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF130Q86XS8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF130Q86XS8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF130Q86XS8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF130Q86XS8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF130Q86XS8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF130Q86XS8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF130Q86XS8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 AC074183.2-201ENST00000623112 922 ntBASIC21.35■■□□□ 1.01
RNF130Q86XS8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF130Q86XS8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF130Q86XS8 ALDH1A3-203ENST00000557963 1670 ntBASIC21.34■■□□□ 1.01
RNF130Q86XS8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF130Q86XS8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF130Q86XS8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF130Q86XS8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.34■■□□□ 1.01
RNF130Q86XS8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF130Q86XS8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RNF130Q86XS8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF130Q86XS8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF130Q86XS8 AC092068.2-201ENST00000590491 1708 ntBASIC21.34■■□□□ 1.01
RNF130Q86XS8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF130Q86XS8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF130Q86XS8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RNF130Q86XS8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF130Q86XS8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RNF130Q86XS8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RNF130Q86XS8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RNF130Q86XS8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RNF130Q86XS8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF130Q86XS8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RNF130Q86XS8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RNF130Q86XS8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.33■■□□□ 1
RNF130Q86XS8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF130Q86XS8 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.32■■□□□ 1
RNF130Q86XS8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.32■■□□□ 1
RNF130Q86XS8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF130Q86XS8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF130Q86XS8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF130Q86XS8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RNF130Q86XS8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF130Q86XS8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms