Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC28Q86X40 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC28Q86X40 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC28Q86X40 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC28Q86X40 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC28Q86X40 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LRRC28Q86X40 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.16■□□□□ 0.82
LRRC28Q86X40 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC28Q86X40 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC28Q86X40 HLA-L-211ENST00000482052 1765 ntBASIC20.16■□□□□ 0.82
LRRC28Q86X40 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC28Q86X40 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
LRRC28Q86X40 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
LRRC28Q86X40 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC28Q86X40 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC28Q86X40 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.15■□□□□ 0.82
LRRC28Q86X40 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC28Q86X40 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LRRC28Q86X40 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC28Q86X40 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRRC28Q86X40 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC28Q86X40 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
LRRC28Q86X40 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC28Q86X40 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC28Q86X40 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.13■□□□□ 0.81
LRRC28Q86X40 AC087393.1-201ENST00000582896 145 ntBASIC20.13■□□□□ 0.81
LRRC28Q86X40 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC28Q86X40 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC28Q86X40 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC28Q86X40 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC28Q86X40 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC28Q86X40 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC28Q86X40 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LRRC28Q86X40 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 RPS2P7-201ENST00000447334 885 ntBASIC20.12■□□□□ 0.81
LRRC28Q86X40 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC28Q86X40 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC28Q86X40 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC28Q86X40 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC28Q86X40 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC28Q86X40 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC28Q86X40 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC28Q86X40 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC28Q86X40 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC28Q86X40 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC28Q86X40 AC127496.7-201ENST00000625110 1798 ntBASIC20.11■□□□□ 0.81
LRRC28Q86X40 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC28Q86X40 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC28Q86X40 LINC00526-201ENST00000581067 1875 ntBASIC20.1■□□□□ 0.81
LRRC28Q86X40 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
LRRC28Q86X40 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC28Q86X40 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRC28Q86X40 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRC28Q86X40 AC010980.1-201ENST00000587192 1142 ntBASIC20.1■□□□□ 0.81
LRRC28Q86X40 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC28Q86X40 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC28Q86X40 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC28Q86X40 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LRRC28Q86X40 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC28Q86X40 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LRRC28Q86X40 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LRRC28Q86X40 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC28Q86X40 AC137767.1-201ENST00000602918 1920 ntBASIC20.09■□□□□ 0.81
LRRC28Q86X40 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC28Q86X40 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC28Q86X40 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC28Q86X40 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.08■□□□□ 0.81
LRRC28Q86X40 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.08■□□□□ 0.81
LRRC28Q86X40 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.08■□□□□ 0.8
LRRC28Q86X40 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms