Protein–RNA interactions for Protein: Q7RTT6

SSX6, Putative protein SSX6, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX6Q7RTT6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SSX6Q7RTT6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX6Q7RTT6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 AC233723.2-201ENST00000623798 2106 ntBASIC20.27■□□□□ 0.84
SSX6Q7RTT6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 DUSP8P3-201ENST00000399571 1760 ntBASIC20.27■□□□□ 0.84
SSX6Q7RTT6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX6Q7RTT6 AC092068.2-201ENST00000590491 1708 ntBASIC20.27■□□□□ 0.83
SSX6Q7RTT6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.27■□□□□ 0.83
SSX6Q7RTT6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.26■□□□□ 0.83
SSX6Q7RTT6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX6Q7RTT6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SSX6Q7RTT6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.25■□□□□ 0.83
SSX6Q7RTT6 C1orf229-201ENST00000623686 2258 ntBASIC20.25■□□□□ 0.83
SSX6Q7RTT6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SSX6Q7RTT6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX6Q7RTT6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX6Q7RTT6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.25■□□□□ 0.83
SSX6Q7RTT6 AC087393.1-201ENST00000582896 145 ntBASIC20.24■□□□□ 0.83
SSX6Q7RTT6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX6Q7RTT6 AC018755.3-202ENST00000596210 929 ntBASIC20.24■□□□□ 0.83
SSX6Q7RTT6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSX6Q7RTT6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.24■□□□□ 0.83
SSX6Q7RTT6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.24■□□□□ 0.83
SSX6Q7RTT6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX6Q7RTT6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX6Q7RTT6 EP400NL-214ENST00000641289 2402 ntBASIC20.24■□□□□ 0.83
SSX6Q7RTT6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SSX6Q7RTT6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.24■□□□□ 0.83
SSX6Q7RTT6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX6Q7RTT6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 AL592295.1-201ENST00000400984 884 ntBASIC20.22■□□□□ 0.83
SSX6Q7RTT6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 RNF126P1-201ENST00000567452 1320 ntBASIC20.22■□□□□ 0.83
SSX6Q7RTT6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX6Q7RTT6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SSX6Q7RTT6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 AL161729.1-201ENST00000604104 1402 ntBASIC20.2■□□□□ 0.82
SSX6Q7RTT6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 CLDN5-201ENST00000403084 2357 ntBASIC20.2■□□□□ 0.82
SSX6Q7RTT6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.2■□□□□ 0.82
SSX6Q7RTT6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.2■□□□□ 0.82
SSX6Q7RTT6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSX6Q7RTT6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SSX6Q7RTT6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
SSX6Q7RTT6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SSX6Q7RTT6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms