Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 UNC93B3-201ENST00000308076 687 ntBASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 AC005837.3-201ENST00000612163 286 ntBASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
H3F3CQ6NXT2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3F3CQ6NXT2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 AC009102.2-201ENST00000606772 1639 ntBASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 DUX4L19-201ENST00000557448 1267 ntBASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.05■□□□□ 0.96
H3F3CQ6NXT2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 PBX2P1-201ENST00000493219 1291 ntBASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 AC142381.3-201ENST00000568208 1670 ntBASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3CQ6NXT2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3CQ6NXT2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 AL136162.1-201ENST00000607711 1078 ntBASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 AC092171.4-201ENST00000609130 632 ntBASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3F3CQ6NXT2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H3F3CQ6NXT2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.01■□□□□ 0.95
H3F3CQ6NXT2 ALDH1A3-203ENST00000557963 1670 ntBASIC21.01■□□□□ 0.95
H3F3CQ6NXT2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H3F3CQ6NXT2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H3F3CQ6NXT2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3F3CQ6NXT2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21■□□□□ 0.95
H3F3CQ6NXT2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
H3F3CQ6NXT2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21■□□□□ 0.95
H3F3CQ6NXT2 AC135279.3-201ENST00000610945 1311 ntBASIC21■□□□□ 0.95
H3F3CQ6NXT2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21■□□□□ 0.95
H3F3CQ6NXT2 C17orf82-201ENST00000623772 1530 ntBASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 AC138932.3-201ENST00000567634 1902 ntBASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3CQ6NXT2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms