Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 IGHV3-19-201ENST00000521488 291 ntBASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 TERF1P2-201ENST00000583350 1212 ntBASIC23.84■■□□□ 1.41
PTCRAQ6ISU1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 pRNA.6-201ENST00000610482 90 ntBASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 pRNA.5-201ENST00000612139 90 ntBASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 pRNA.11-201ENST00000618423 90 ntBASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 pRNA.13-201ENST00000619112 90 ntBASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.83■■□□□ 1.41
PTCRAQ6ISU1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
PTCRAQ6ISU1 LINC02228-203ENST00000641970 1355 ntBASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 TMEM191A-211ENST00000637163 1067 ntBASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCRAQ6ISU1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCRAQ6ISU1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCRAQ6ISU1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCRAQ6ISU1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PTCRAQ6ISU1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.81■■□□□ 1.4
PTCRAQ6ISU1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.81■■□□□ 1.4
PTCRAQ6ISU1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCRAQ6ISU1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.81■■□□□ 1.4
PTCRAQ6ISU1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCRAQ6ISU1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCRAQ6ISU1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCRAQ6ISU1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCRAQ6ISU1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.8■■□□□ 1.4
PTCRAQ6ISU1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.8■■□□□ 1.4
PTCRAQ6ISU1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCRAQ6ISU1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCRAQ6ISU1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 RAP2CP1-201ENST00000605103 478 ntBASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCRAQ6ISU1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 AC104771.1-201ENST00000603335 964 ntBASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCRAQ6ISU1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 CDCA4P2-201ENST00000441182 718 ntBASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.76■■□□□ 1.39
PTCRAQ6ISU1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms