Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.41■■□□□ 1.82
KRT40Q6A162 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.41■■□□□ 1.82
KRT40Q6A162 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
KRT40Q6A162 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.4■■□□□ 1.82
KRT40Q6A162 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
KRT40Q6A162 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.4■■□□□ 1.82
KRT40Q6A162 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KRT40Q6A162 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KRT40Q6A162 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
KRT40Q6A162 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
KRT40Q6A162 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KRT40Q6A162 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
KRT40Q6A162 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
KRT40Q6A162 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.39■■□□□ 1.82
KRT40Q6A162 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.39■■□□□ 1.82
KRT40Q6A162 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.39■■□□□ 1.82
KRT40Q6A162 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
KRT40Q6A162 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KRT40Q6A162 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KRT40Q6A162 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.38■■□□□ 1.81
KRT40Q6A162 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
KRT40Q6A162 AC137630.3-201ENST00000607245 391 ntBASIC26.38■■□□□ 1.81
KRT40Q6A162 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.38■■□□□ 1.81
KRT40Q6A162 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
KRT40Q6A162 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KRT40Q6A162 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KRT40Q6A162 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
KRT40Q6A162 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
KRT40Q6A162 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
KRT40Q6A162 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT40Q6A162 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT40Q6A162 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT40Q6A162 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT40Q6A162 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
KRT40Q6A162 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT40Q6A162 MIR638-201ENST00000385237 100 ntBASIC26.37■■□□□ 1.81
KRT40Q6A162 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.37■■□□□ 1.81
KRT40Q6A162 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.37■■□□□ 1.81
KRT40Q6A162 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.37■■□□□ 1.81
KRT40Q6A162 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.37■■□□□ 1.81
KRT40Q6A162 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.37■■□□□ 1.81
KRT40Q6A162 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT40Q6A162 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
KRT40Q6A162 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.36■■□□□ 1.81
KRT40Q6A162 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
KRT40Q6A162 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
KRT40Q6A162 ALDH1A3-203ENST00000557963 1670 ntBASIC26.36■■□□□ 1.81
KRT40Q6A162 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.36■■□□□ 1.81
KRT40Q6A162 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.36■■□□□ 1.81
KRT40Q6A162 AC004448.1-201ENST00000458332 883 ntBASIC26.36■■□□□ 1.81
KRT40Q6A162 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT40Q6A162 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT40Q6A162 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT40Q6A162 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT40Q6A162 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
KRT40Q6A162 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
KRT40Q6A162 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
KRT40Q6A162 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
KRT40Q6A162 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
KRT40Q6A162 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.35■■□□□ 1.81
KRT40Q6A162 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
KRT40Q6A162 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
KRT40Q6A162 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT40Q6A162 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.34■■□□□ 1.81
KRT40Q6A162 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
KRT40Q6A162 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
KRT40Q6A162 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.34■■□□□ 1.81
KRT40Q6A162 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
KRT40Q6A162 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.33■■□□□ 1.81
KRT40Q6A162 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
KRT40Q6A162 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KRT40Q6A162 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KRT40Q6A162 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT40Q6A162 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KRT40Q6A162 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.32■■□□□ 1.8
KRT40Q6A162 Z92544.1-202ENST00000571933 1220 ntBASIC26.32■■□□□ 1.8
KRT40Q6A162 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
KRT40Q6A162 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KRT40Q6A162 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
KRT40Q6A162 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT40Q6A162 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KRT40Q6A162 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT40Q6A162 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.31■■□□□ 1.8
KRT40Q6A162 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.31■■□□□ 1.8
KRT40Q6A162 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.31■■□□□ 1.8
KRT40Q6A162 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT40Q6A162 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT40Q6A162 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KRT40Q6A162 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KRT40Q6A162 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT40Q6A162 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms