Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
RNF213Q63HN8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF213Q63HN8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.47□□□□□ -0.41
RNF213Q63HN8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF213Q63HN8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.47□□□□□ -0.41
RNF213Q63HN8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC12.47□□□□□ -0.41
RNF213Q63HN8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF213Q63HN8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF213Q63HN8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF213Q63HN8 POU5F1P3-201ENST00000428824 1078 ntBASIC12.47□□□□□ -0.41
RNF213Q63HN8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RNF213Q63HN8 AC211429.1-201ENST00000415277 523 ntBASIC12.46□□□□□ -0.41
RNF213Q63HN8 DUSP5P2-201ENST00000426873 1033 ntBASIC12.46□□□□□ -0.41
RNF213Q63HN8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
RNF213Q63HN8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RNF213Q63HN8 AL445228.2-201ENST00000605589 952 ntBASIC12.46□□□□□ -0.41
RNF213Q63HN8 AP006294.2-201ENST00000641667 209 ntBASIC12.46□□□□□ -0.41
RNF213Q63HN8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RNF213Q63HN8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC12.46□□□□□ -0.41
RNF213Q63HN8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC12.46□□□□□ -0.41
RNF213Q63HN8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RNF213Q63HN8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RNF213Q63HN8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.46□□□□□ -0.41
RNF213Q63HN8 AC098934.4-201ENST00000564127 592 ntBASIC12.46□□□□□ -0.41
RNF213Q63HN8 MIR3181-201ENST00000578512 73 ntBASIC12.46□□□□□ -0.41
RNF213Q63HN8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.46□□□□□ -0.41
RNF213Q63HN8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RNF213Q63HN8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.46□□□□□ -0.42
RNF213Q63HN8 AC011767.1-201ENST00000617410 1153 ntBASIC12.46□□□□□ -0.42
RNF213Q63HN8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
RNF213Q63HN8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
RNF213Q63HN8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RNF213Q63HN8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RNF213Q63HN8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RNF213Q63HN8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RNF213Q63HN8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RNF213Q63HN8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RNF213Q63HN8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RNF213Q63HN8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC12.45□□□□□ -0.42
RNF213Q63HN8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RNF213Q63HN8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF213Q63HN8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RNF213Q63HN8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF213Q63HN8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF213Q63HN8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF213Q63HN8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF213Q63HN8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RNF213Q63HN8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF213Q63HN8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RNF213Q63HN8 TSPY6P-201ENST00000448518 926 ntBASIC12.43□□□□□ -0.42
RNF213Q63HN8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF213Q63HN8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.43□□□□□ -0.42
RNF213Q63HN8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF213Q63HN8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF213Q63HN8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RNF213Q63HN8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.43□□□□□ -0.42
RNF213Q63HN8 AC009102.2-201ENST00000606772 1639 ntBASIC12.43□□□□□ -0.42
RNF213Q63HN8 AC083906.2-201ENST00000511578 360 ntBASIC12.43□□□□□ -0.42
RNF213Q63HN8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RNF213Q63HN8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF213Q63HN8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF213Q63HN8 COX20-201ENST00000366528 568 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF213Q63HN8 HES6-206ENST00000409574 738 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF213Q63HN8 AL449106.1-201ENST00000608517 1980 ntBASIC12.42□□□□□ -0.42
RNF213Q63HN8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RNF213Q63HN8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.42□□□□□ -0.42
RNF213Q63HN8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RNF213Q63HN8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.42□□□□□ -0.42
RNF213Q63HN8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RNF213Q63HN8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RNF213Q63HN8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RNF213Q63HN8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RNF213Q63HN8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RNF213Q63HN8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RNF213Q63HN8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.42□□□□□ -0.42
RNF213Q63HN8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC12.42□□□□□ -0.42
RNF213Q63HN8 AC126544.1-201ENST00000580842 1059 ntBASIC12.42□□□□□ -0.42
RNF213Q63HN8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms