Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TTC39BQ5VTQ0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.7■■□□□ 1.38
TTC39BQ5VTQ0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
TTC39BQ5VTQ0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC39BQ5VTQ0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.67■■□□□ 1.38
TTC39BQ5VTQ0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.67■■□□□ 1.38
TTC39BQ5VTQ0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39BQ5VTQ0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39BQ5VTQ0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39BQ5VTQ0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39BQ5VTQ0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39BQ5VTQ0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39BQ5VTQ0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TTC39BQ5VTQ0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39BQ5VTQ0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39BQ5VTQ0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39BQ5VTQ0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC39BQ5VTQ0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC39BQ5VTQ0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC39BQ5VTQ0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39BQ5VTQ0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.64■■□□□ 1.38
TTC39BQ5VTQ0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39BQ5VTQ0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39BQ5VTQ0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39BQ5VTQ0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39BQ5VTQ0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.64■■□□□ 1.37
TTC39BQ5VTQ0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
TTC39BQ5VTQ0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39BQ5VTQ0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TTC39BQ5VTQ0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39BQ5VTQ0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39BQ5VTQ0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 AL117332.1-201ENST00000622628 974 ntBASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TTC39BQ5VTQ0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39BQ5VTQ0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39BQ5VTQ0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39BQ5VTQ0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TTC39BQ5VTQ0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.61■■□□□ 1.37
TTC39BQ5VTQ0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39BQ5VTQ0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39BQ5VTQ0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 MIR3621-201ENST00000580529 85 ntBASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 AL356740.2-201ENST00000601559 647 ntBASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.6■■□□□ 1.37
TTC39BQ5VTQ0 AC005703.6-201ENST00000623265 1329 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms