Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 KRT8P33-201ENST00000508125 1423 ntBASIC22.05■■□□□ 1.12
SGO1Q5FBB7 AL161729.1-201ENST00000604104 1402 ntBASIC22.05■■□□□ 1.12
SGO1Q5FBB7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 C9orf163-202ENST00000624034 2573 ntBASIC22.04■■□□□ 1.12
SGO1Q5FBB7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SGO1Q5FBB7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SGO1Q5FBB7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.02■■□□□ 1.12
SGO1Q5FBB7 KRT18P24-201ENST00000344739 1156 ntBASIC22.02■■□□□ 1.12
SGO1Q5FBB7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SGO1Q5FBB7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 MIR4281-201ENST00000580852 62 ntBASIC22.01■■□□□ 1.11
SGO1Q5FBB7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.01■■□□□ 1.11
SGO1Q5FBB7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
SGO1Q5FBB7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SGO1Q5FBB7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SGO1Q5FBB7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22■■□□□ 1.11
SGO1Q5FBB7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22■■□□□ 1.11
SGO1Q5FBB7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SGO1Q5FBB7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22■■□□□ 1.11
SGO1Q5FBB7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22■■□□□ 1.11
SGO1Q5FBB7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22■■□□□ 1.11
SGO1Q5FBB7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22■■□□□ 1.11
SGO1Q5FBB7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22■■□□□ 1.11
SGO1Q5FBB7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22■■□□□ 1.11
SGO1Q5FBB7 AC068473.5-201ENST00000616428 2072 ntBASIC22■■□□□ 1.11
SGO1Q5FBB7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SGO1Q5FBB7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SGO1Q5FBB7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SGO1Q5FBB7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.99■■□□□ 1.11
SGO1Q5FBB7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
SGO1Q5FBB7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SGO1Q5FBB7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SGO1Q5FBB7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.98■■□□□ 1.11
SGO1Q5FBB7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SGO1Q5FBB7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.98■■□□□ 1.11
SGO1Q5FBB7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SGO1Q5FBB7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SGO1Q5FBB7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SGO1Q5FBB7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SGO1Q5FBB7 ANOS2P-203ENST00000472227 1816 ntBASIC21.97■■□□□ 1.11
SGO1Q5FBB7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
SGO1Q5FBB7 AF131216.4-201ENST00000638924 1588 ntBASIC21.97■■□□□ 1.11
SGO1Q5FBB7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SGO1Q5FBB7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SGO1Q5FBB7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms