Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF260Q3ZCT1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZNF260Q3ZCT1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF260Q3ZCT1 GUSBP5-202ENST00000510805 1989 ntBASIC19.38■□□□□ 0.69
ZNF260Q3ZCT1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
ZNF260Q3ZCT1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF260Q3ZCT1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF260Q3ZCT1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF260Q3ZCT1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ZNF260Q3ZCT1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF260Q3ZCT1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 ECEL1P1-201ENST00000373592 1742 ntBASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF260Q3ZCT1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF260Q3ZCT1 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF260Q3ZCT1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ZNF260Q3ZCT1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF260Q3ZCT1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF260Q3ZCT1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF260Q3ZCT1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF260Q3ZCT1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF260Q3ZCT1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF260Q3ZCT1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.33■□□□□ 0.69
ZNF260Q3ZCT1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ZNF260Q3ZCT1 RARRES2P2-201ENST00000394842 485 ntBASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 AC127496.7-201ENST00000625110 1798 ntBASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF260Q3ZCT1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF260Q3ZCT1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms