Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11AP62491 AC022413.1-201ENST00000624602 984 ntBASIC18.4■□□□□ 0.54
RAB11AP62491 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RAB11AP62491 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11AP62491 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB11AP62491 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB11AP62491 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB11AP62491 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RAB11AP62491 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.39■□□□□ 0.54
RAB11AP62491 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB11AP62491 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 AC233723.2-201ENST00000623798 2106 ntBASIC18.39■□□□□ 0.53
RAB11AP62491 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RAB11AP62491 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11AP62491 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB11AP62491 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11AP62491 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RAB11AP62491 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB11AP62491 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB11AP62491 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11AP62491 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11AP62491 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11AP62491 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
RAB11AP62491 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAB11AP62491 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11AP62491 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11AP62491 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11AP62491 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11AP62491 AL024507.2-201ENST00000606070 2574 ntBASIC18.38■□□□□ 0.53
RAB11AP62491 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RAB11AP62491 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB11AP62491 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB11AP62491 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB11AP62491 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RAB11AP62491 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB11AP62491 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB11AP62491 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB11AP62491 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB11AP62491 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB11AP62491 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB11AP62491 AC007029.1-201ENST00000604183 313 ntBASIC18.37■□□□□ 0.53
RAB11AP62491 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB11AP62491 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB11AP62491 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB11AP62491 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB11AP62491 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB11AP62491 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB11AP62491 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAB11AP62491 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAB11AP62491 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB11AP62491 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB11AP62491 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11AP62491 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.34■□□□□ 0.53
RAB11AP62491 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11AP62491 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11AP62491 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.33■□□□□ 0.53
RAB11AP62491 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11AP62491 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11AP62491 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11AP62491 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11AP62491 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB11AP62491 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11AP62491 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB11AP62491 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.33■□□□□ 0.52
RAB11AP62491 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RAB11AP62491 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RAB11AP62491 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11AP62491 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11AP62491 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB11AP62491 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB11AP62491 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB11AP62491 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB11AP62491 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms