Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 SNX3-202ENST00000349379 890 ntTSL 2 BASIC30.85■■■□□ 2.53
ZC3H6P61129 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
ZC3H6P61129 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.85■■■□□ 2.53
ZC3H6P61129 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
ZC3H6P61129 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ZC3H6P61129 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
ZC3H6P61129 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
ZC3H6P61129 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
ZC3H6P61129 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
ZC3H6P61129 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
ZC3H6P61129 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.84■■■□□ 2.53
ZC3H6P61129 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
ZC3H6P61129 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.83■■■□□ 2.53
ZC3H6P61129 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ZC3H6P61129 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
ZC3H6P61129 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.83■■■□□ 2.53
ZC3H6P61129 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.83■■■□□ 2.53
ZC3H6P61129 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ZC3H6P61129 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.83■■■□□ 2.53
ZC3H6P61129 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ZC3H6P61129 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.83■■■□□ 2.53
ZC3H6P61129 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
ZC3H6P61129 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
ZC3H6P61129 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ZC3H6P61129 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
ZC3H6P61129 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC30.82■■■□□ 2.52
ZC3H6P61129 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC30.82■■■□□ 2.52
ZC3H6P61129 YBX1P1-201ENST00000445822 960 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.82■■■□□ 2.52
ZC3H6P61129 DUX4L2-201ENST00000561772 1275 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 AC126544.1-201ENST00000580842 1059 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.82■■■□□ 2.52
ZC3H6P61129 DUX4L6-201ENST00000626483 1275 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 DUX4L1-201ENST00000627662 1275 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 DUX4L8-201ENST00000629013 1275 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 DUX4L3-201ENST00000630187 1275 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 DUX4L7-201ENST00000630678 1275 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 DUX4L5-201ENST00000630834 1275 ntBASIC30.82■■■□□ 2.52
ZC3H6P61129 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.82■■■□□ 2.52
ZC3H6P61129 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
ZC3H6P61129 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.81■■■□□ 2.52
ZC3H6P61129 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.81■■■□□ 2.52
ZC3H6P61129 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ZC3H6P61129 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.81■■■□□ 2.52
ZC3H6P61129 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.81■■■□□ 2.52
ZC3H6P61129 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ZC3H6P61129 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
ZC3H6P61129 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ZC3H6P61129 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
ZC3H6P61129 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
ZC3H6P61129 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
ZC3H6P61129 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
ZC3H6P61129 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ZC3H6P61129 AC092803.2-201ENST00000564287 1899 ntBASIC30.79■■■□□ 2.52
ZC3H6P61129 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ZC3H6P61129 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.79■■■□□ 2.52
ZC3H6P61129 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.79■■■□□ 2.52
ZC3H6P61129 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ZC3H6P61129 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ZC3H6P61129 VGF-203ENST00000611537 1622 ntTSL 5 BASIC30.79■■■□□ 2.52
ZC3H6P61129 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.79■■■□□ 2.52
ZC3H6P61129 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ZC3H6P61129 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ZC3H6P61129 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
ZC3H6P61129 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.78■■■□□ 2.52
ZC3H6P61129 TSPY26P-201ENST00000476365 1326 ntBASIC30.77■■■□□ 2.52
ZC3H6P61129 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.77■■■□□ 2.52
ZC3H6P61129 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ZC3H6P61129 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ZC3H6P61129 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ZC3H6P61129 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
ZC3H6P61129 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.77■■■□□ 2.52
ZC3H6P61129 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ZC3H6P61129 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.77■■■□□ 2.52
ZC3H6P61129 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ZC3H6P61129 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.76■■■□□ 2.52
ZC3H6P61129 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
ZC3H6P61129 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
ZC3H6P61129 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ZC3H6P61129 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ZC3H6P61129 pRNA.6-201ENST00000610482 90 ntBASIC30.76■■■□□ 2.51
ZC3H6P61129 pRNA.5-201ENST00000612139 90 ntBASIC30.76■■■□□ 2.51
ZC3H6P61129 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.76■■■□□ 2.51
ZC3H6P61129 pRNA.11-201ENST00000618423 90 ntBASIC30.76■■■□□ 2.51
ZC3H6P61129 pRNA.13-201ENST00000619112 90 ntBASIC30.76■■■□□ 2.51
ZC3H6P61129 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
ZC3H6P61129 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ZC3H6P61129 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.75■■■□□ 2.51
ZC3H6P61129 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZC3H6P61129 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC30.75■■■□□ 2.51
ZC3H6P61129 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZC3H6P61129 NME4-202ENST00000382940 766 ntTSL 3 BASIC30.75■■■□□ 2.51
ZC3H6P61129 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.75■■■□□ 2.51
ZC3H6P61129 SLC47A1P1-202ENST00000449666 945 ntBASIC30.75■■■□□ 2.51
ZC3H6P61129 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.75■■■□□ 2.51
ZC3H6P61129 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.75■■■□□ 2.51
ZC3H6P61129 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.75■■■□□ 2.51
ZC3H6P61129 NME4-211ENST00000620944 1193 ntTSL 2 BASIC30.75■■■□□ 2.51
ZC3H6P61129 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZC3H6P61129 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms