Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.5■■■□□ 2.31
KCNQ4P56696 AC241377.3-202ENST00000626088 1088 ntBASIC29.5■■■□□ 2.31
KCNQ4P56696 AC241585.3-202ENST00000628937 1088 ntBASIC29.5■■■□□ 2.31
KCNQ4P56696 AC245100.8-202ENST00000629247 1058 ntBASIC29.5■■■□□ 2.31
KCNQ4P56696 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
KCNQ4P56696 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
KCNQ4P56696 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
KCNQ4P56696 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.49■■■□□ 2.31
KCNQ4P56696 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.49■■■□□ 2.31
KCNQ4P56696 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
KCNQ4P56696 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
KCNQ4P56696 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
KCNQ4P56696 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
KCNQ4P56696 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.48■■■□□ 2.31
KCNQ4P56696 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.48■■■□□ 2.31
KCNQ4P56696 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
KCNQ4P56696 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.48■■■□□ 2.31
KCNQ4P56696 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.48■■■□□ 2.31
KCNQ4P56696 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.48■■■□□ 2.31
KCNQ4P56696 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
KCNQ4P56696 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
KCNQ4P56696 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.47■■■□□ 2.31
KCNQ4P56696 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.47■■■□□ 2.31
KCNQ4P56696 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC29.47■■■□□ 2.31
KCNQ4P56696 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC29.47■■■□□ 2.31
KCNQ4P56696 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.47■■■□□ 2.31
KCNQ4P56696 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
KCNQ4P56696 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
KCNQ4P56696 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.46■■■□□ 2.31
KCNQ4P56696 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
KCNQ4P56696 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
KCNQ4P56696 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
KCNQ4P56696 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.46■■■□□ 2.31
KCNQ4P56696 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
KCNQ4P56696 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.46■■■□□ 2.31
KCNQ4P56696 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
KCNQ4P56696 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
KCNQ4P56696 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.45■■■□□ 2.31
KCNQ4P56696 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.45■■■□□ 2.31
KCNQ4P56696 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
KCNQ4P56696 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
KCNQ4P56696 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
KCNQ4P56696 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
KCNQ4P56696 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
KCNQ4P56696 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
KCNQ4P56696 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
KCNQ4P56696 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.44■■■□□ 2.3
KCNQ4P56696 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.43■■■□□ 2.3
KCNQ4P56696 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
KCNQ4P56696 AC010501.1-201ENST00000606270 1962 ntBASIC29.43■■■□□ 2.3
KCNQ4P56696 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
KCNQ4P56696 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
KCNQ4P56696 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.42■■■□□ 2.3
KCNQ4P56696 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.42■■■□□ 2.3
KCNQ4P56696 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
KCNQ4P56696 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
KCNQ4P56696 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.42■■■□□ 2.3
KCNQ4P56696 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
KCNQ4P56696 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
KCNQ4P56696 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
KCNQ4P56696 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
KCNQ4P56696 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
KCNQ4P56696 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
KCNQ4P56696 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.42■■■□□ 2.3
KCNQ4P56696 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.41■■■□□ 2.3
KCNQ4P56696 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
KCNQ4P56696 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.41■■■□□ 2.3
KCNQ4P56696 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.41■■■□□ 2.3
KCNQ4P56696 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.41■■■□□ 2.3
KCNQ4P56696 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.41■■■□□ 2.3
KCNQ4P56696 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.41■■■□□ 2.3
KCNQ4P56696 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.41■■■□□ 2.3
KCNQ4P56696 pRNA.6-201ENST00000610482 90 ntBASIC29.41■■■□□ 2.3
KCNQ4P56696 pRNA.5-201ENST00000612139 90 ntBASIC29.41■■■□□ 2.3
KCNQ4P56696 pRNA.11-201ENST00000618423 90 ntBASIC29.41■■■□□ 2.3
KCNQ4P56696 pRNA.13-201ENST00000619112 90 ntBASIC29.41■■■□□ 2.3
KCNQ4P56696 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
KCNQ4P56696 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
KCNQ4P56696 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KCNQ4P56696 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.4■■■□□ 2.3
KCNQ4P56696 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KCNQ4P56696 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.4■■■□□ 2.3
KCNQ4P56696 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.4■■■□□ 2.3
KCNQ4P56696 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
KCNQ4P56696 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC29.4■■■□□ 2.3
KCNQ4P56696 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
KCNQ4P56696 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.39■■■□□ 2.3
KCNQ4P56696 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.39■■■□□ 2.3
KCNQ4P56696 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.39■■■□□ 2.3
KCNQ4P56696 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
KCNQ4P56696 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
KCNQ4P56696 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
KCNQ4P56696 HLA-L-209ENST00000420110 1011 ntBASIC29.39■■■□□ 2.3
KCNQ4P56696 CCDC92B-201ENST00000575506 885 ntBASIC29.39■■■□□ 2.3
KCNQ4P56696 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
KCNQ4P56696 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
KCNQ4P56696 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
KCNQ4P56696 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
KCNQ4P56696 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
KCNQ4P56696 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms