Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PSMD4P55036 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PSMD4P55036 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PSMD4P55036 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PSMD4P55036 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PSMD4P55036 SNX5-217ENST00000606557 1087 ntBASIC21.12■□□□□ 0.97
PSMD4P55036 MIR4787-201ENST00000607364 84 ntBASIC21.12■□□□□ 0.97
PSMD4P55036 ABCB10P4-201ENST00000566803 2184 ntBASIC21.12■□□□□ 0.97
PSMD4P55036 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PSMD4P55036 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.11■□□□□ 0.97
PSMD4P55036 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PSMD4P55036 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PSMD4P55036 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PSMD4P55036 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.11■□□□□ 0.97
PSMD4P55036 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PSMD4P55036 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PSMD4P55036 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.1■□□□□ 0.97
PSMD4P55036 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PSMD4P55036 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PSMD4P55036 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PSMD4P55036 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PSMD4P55036 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.1■□□□□ 0.97
PSMD4P55036 AC092028.1-203ENST00000608262 953 ntBASIC21.1■□□□□ 0.97
PSMD4P55036 AL035685.1-201ENST00000636663 812 ntBASIC21.1■□□□□ 0.97
PSMD4P55036 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PSMD4P55036 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.09■□□□□ 0.97
PSMD4P55036 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PSMD4P55036 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PSMD4P55036 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PSMD4P55036 ALDH1A3-203ENST00000557963 1670 ntBASIC21.09■□□□□ 0.97
PSMD4P55036 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PSMD4P55036 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PSMD4P55036 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PSMD4P55036 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PSMD4P55036 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.09■□□□□ 0.97
PSMD4P55036 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.09■□□□□ 0.97
PSMD4P55036 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PSMD4P55036 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PSMD4P55036 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.09■□□□□ 0.97
PSMD4P55036 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PSMD4P55036 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PSMD4P55036 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PSMD4P55036 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
PSMD4P55036 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PSMD4P55036 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PSMD4P55036 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PSMD4P55036 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.08■□□□□ 0.96
PSMD4P55036 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PSMD4P55036 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PSMD4P55036 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PSMD4P55036 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.07■□□□□ 0.96
PSMD4P55036 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.07■□□□□ 0.96
PSMD4P55036 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
PSMD4P55036 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.07■□□□□ 0.96
PSMD4P55036 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.07■□□□□ 0.96
PSMD4P55036 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.07■□□□□ 0.96
PSMD4P55036 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.07■□□□□ 0.96
PSMD4P55036 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PSMD4P55036 MIR6722-201ENST00000617286 78 ntBASIC21.07■□□□□ 0.96
PSMD4P55036 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.07■□□□□ 0.96
PSMD4P55036 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.07■□□□□ 0.96
PSMD4P55036 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PSMD4P55036 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PSMD4P55036 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PSMD4P55036 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.06■□□□□ 0.96
PSMD4P55036 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.06■□□□□ 0.96
PSMD4P55036 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.06■□□□□ 0.96
PSMD4P55036 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PSMD4P55036 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PSMD4P55036 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PSMD4P55036 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PSMD4P55036 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PSMD4P55036 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.05■□□□□ 0.96
PSMD4P55036 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.05■□□□□ 0.96
PSMD4P55036 MTDHP2-201ENST00000601468 714 ntBASIC21.05■□□□□ 0.96
PSMD4P55036 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PSMD4P55036 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PSMD4P55036 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PSMD4P55036 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms