Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YER010CYER010C 705 nt6.52□□□□□ -1.37
MSH4P40965 PAN5YHR063C 1140 nt6.52□□□□□ -1.37
MSH4P40965 IMP3YHR148W 552 nt6.52□□□□□ -1.37
MSH4P40965 YKL169CYKL169C 384 nt6.52□□□□□ -1.37
MSH4P40965 YML101C-AYML101C-A 318 nt6.52□□□□□ -1.37
MSH4P40965 YBL036CYBL036C 774 nt6.52□□□□□ -1.37
MSH4P40965 YBR230W-AYBR230W-A 201 nt6.52□□□□□ -1.37
MSH4P40965 ECM3YOR092W 1842 nt6.52□□□□□ -1.37
MSH4P40965 SSK1YLR006C 2139 nt6.52□□□□□ -1.37
MSH4P40965 SET4YJL105W 1683 nt6.52□□□□□ -1.37
MSH4P40965 APE1YKL103C 1545 nt6.51□□□□□ -1.37
MSH4P40965 FOB1YDR110W 1701 nt6.51□□□□□ -1.37
MSH4P40965 SPC97YHR172W 2472 nt6.51□□□□□ -1.37
MSH4P40965 PFA5YDR459C 1125 nt6.51□□□□□ -1.37
MSH4P40965 YER148W-AYER148W-A 579 nt6.51□□□□□ -1.37
MSH4P40965 YER186CYER186C 921 nt6.51□□□□□ -1.37
MSH4P40965 HSX1tR(CCU)J 72 nt6.51□□□□□ -1.37
MSH4P40965 END3YNL084C 1050 nt6.51□□□□□ -1.37
MSH4P40965 DAL82YNL314W 768 nt6.51□□□□□ -1.37
MSH4P40965 SRL4YPL033C 846 nt6.51□□□□□ -1.37
MSH4P40965 MET16YPR167C 786 nt6.51□□□□□ -1.37
MSH4P40965 UBA1YKL210W 3075 nt6.51□□□□□ -1.37
MSH4P40965 ADE13YLR359W 1449 nt6.5□□□□□ -1.37
MSH4P40965 HSP78YDR258C 2436 nt6.5□□□□□ -1.37
MSH4P40965 GSH2YOL049W 1476 nt6.5□□□□□ -1.37
MSH4P40965 SCEIQ0160 708 nt6.5□□□□□ -1.37
MSH4P40965 YJL171CYJL171C 1191 nt6.5□□□□□ -1.37
MSH4P40965 YJL193WYJL193W 1209 nt6.5□□□□□ -1.37
MSH4P40965 LAC1YKL008C 1257 nt6.5□□□□□ -1.37
MSH4P40965 YMR030W-AYMR030W-A 291 nt6.5□□□□□ -1.37
MSH4P40965 YJR015WYJR015W 1533 nt6.5□□□□□ -1.37
MSH4P40965 RIM101YHL027W 1878 nt6.49□□□□□ -1.37
MSH4P40965 TEC1YBR083W 1461 nt6.49□□□□□ -1.37
MSH4P40965 YCR097W-AYCR097W-A 267 nt6.49□□□□□ -1.37
MSH4P40965 CBS1YDL069C 690 nt6.49□□□□□ -1.37
MSH4P40965 YGR176WYGR176W 348 nt6.49□□□□□ -1.37
MSH4P40965 NVJ1YHR195W 966 nt6.49□□□□□ -1.37
MSH4P40965 ERG3YLR056W 1098 nt6.49□□□□□ -1.37
MSH4P40965 URA5YML106W 681 nt6.49□□□□□ -1.37
MSH4P40965 HSE1YHL002W 1359 nt6.48□□□□□ -1.37
MSH4P40965 YDR249CYDR249C 1122 nt6.48□□□□□ -1.37
MSH4P40965 GIC2YDR309C 1152 nt6.48□□□□□ -1.37
MSH4P40965 YFL019CYFL019C 354 nt6.48□□□□□ -1.37
MSH4P40965 KXD1YGL079W 657 nt6.48□□□□□ -1.37
MSH4P40965 RSM26YJR101W 801 nt6.48□□□□□ -1.37
MSH4P40965 YKL151CYKL151C 1014 nt6.48□□□□□ -1.37
MSH4P40965 YLR194CYLR194C 765 nt6.48□□□□□ -1.37
MSH4P40965 YNL143CYNL143C 393 nt6.48□□□□□ -1.37
MSH4P40965 YOR097CYOR097C 528 nt6.48□□□□□ -1.37
MSH4P40965 SMA1YPL027W 738 nt6.48□□□□□ -1.37
MSH4P40965 SSO1YPL232W 873 nt6.48□□□□□ -1.37
MSH4P40965 TIM54YJL054W 1437 nt6.48□□□□□ -1.37
MSH4P40965 VPS1YKR001C 2115 nt6.47□□□□□ -1.37
MSH4P40965 SSU1YPL092W 1377 nt6.47□□□□□ -1.37
MSH4P40965 FHL1YPR104C 2811 nt6.47□□□□□ -1.37
MSH4P40965 YLR345WYLR345W 1530 nt6.47□□□□□ -1.37
MSH4P40965 YDR396WYDR396W 501 nt6.47□□□□□ -1.37
MSH4P40965 ERJ5YFR041C 888 nt6.47□□□□□ -1.37
MSH4P40965 PEF1YGR058W 1008 nt6.47□□□□□ -1.37
MSH4P40965 YMR086C-AYMR086C-A 339 nt6.47□□□□□ -1.37
MSH4P40965 YNL171CYNL171C 369 nt6.47□□□□□ -1.37
MSH4P40965 PIN2YOR104W 849 nt6.47□□□□□ -1.37
MSH4P40965 YDR034C-CYDR034C-C 1317 nt6.47□□□□□ -1.37
MSH4P40965 YLR410W-AYLR410W-A 1317 nt6.47□□□□□ -1.37
MSH4P40965 YRF1-4YLR466W 4149 nt6.47□□□□□ -1.37
MSH4P40965 TAX4YJL083W 1815 nt6.46□□□□□ -1.37
MSH4P40965 PRO3YER023W 861 nt6.46□□□□□ -1.38
MSH4P40965 IRC6YFR043C 714 nt6.46□□□□□ -1.38
MSH4P40965 POP6YGR030C 477 nt6.46□□□□□ -1.38
MSH4P40965 MAL13YGR288W 1422 nt6.46□□□□□ -1.38
MSH4P40965 CPR6YLR216C 1116 nt6.46□□□□□ -1.38
MSH4P40965 NOP2YNL061W 1857 nt6.46□□□□□ -1.38
MSH4P40965 PSH1YOL054W 1221 nt6.46□□□□□ -1.38
MSH4P40965 YPR153WYPR153W 423 nt6.46□□□□□ -1.38
MSH4P40965 FKH1YIL131C 1455 nt6.46□□□□□ -1.38
MSH4P40965 APM3YBR288C 1452 nt6.46□□□□□ -1.38
MSH4P40965 RGT1YKL038W 3513 nt6.45□□□□□ -1.38
MSH4P40965 YFR057WYFR057W 456 nt6.45□□□□□ -1.38
MSH4P40965 YGR182CYGR182C 354 nt6.45□□□□□ -1.38
MSH4P40965 POL32YJR043C 1053 nt6.45□□□□□ -1.38
MSH4P40965 POR1YNL055C 852 nt6.45□□□□□ -1.38
MSH4P40965 YOL131WYOL131W 327 nt6.45□□□□□ -1.38
MSH4P40965 SUE1YPR151C 621 nt6.45□□□□□ -1.38
MSH4P40965 MLC2YPR188C 492 nt6.45□□□□□ -1.38
MSH4P40965 CCZ1YBR131W 2115 nt6.45□□□□□ -1.38
MSH4P40965 PPR1YLR014C 2715 nt6.45□□□□□ -1.38
MSH4P40965 RIT1YMR283C 1542 nt6.45□□□□□ -1.38
MSH4P40965 YEH1YLL012W 1722 nt6.45□□□□□ -1.38
MSH4P40965 RTT106YNL206C 1368 nt6.44□□□□□ -1.38
MSH4P40965 IXR1YKL032C 1794 nt6.44□□□□□ -1.38
MSH4P40965 VNX1YNL321W 2727 nt6.44□□□□□ -1.38
MSH4P40965 VMA6YLR447C 1038 nt6.44□□□□□ -1.38
MSH4P40965 ERI1YPL096C-A 207 nt6.44□□□□□ -1.38
MSH4P40965 MRL1YPR079W 1146 nt6.44□□□□□ -1.38
MSH4P40965 YBR134WYBR134W 402 nt6.44□□□□□ -1.38
MSH4P40965 YCL041CYCL041C 495 nt6.44□□□□□ -1.38
MSH4P40965 ERG7YHR072W 2196 nt6.44□□□□□ -1.38
MSH4P40965 VTC2YFL004W 2487 nt6.43□□□□□ -1.38
MSH4P40965 AAP1YHR047C 2571 nt6.43□□□□□ -1.38
MSH4P40965 TRP3YKL211C 1455 nt6.43□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms