Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YLR307C-AYLR307C-A 264 nt5.32□□□□□ -1.56
TDP1P38319 YMR178WYMR178W 825 nt5.32□□□□□ -1.56
TDP1P38319 RUF5-1RUF5-1 710 nt5.32□□□□□ -1.56
TDP1P38319 RUF5-2RUF5-2 710 nt5.32□□□□□ -1.56
TDP1P38319 NOP2YNL061W 1857 nt5.32□□□□□ -1.56
TDP1P38319 FKH1YIL131C 1455 nt5.32□□□□□ -1.56
TDP1P38319 CCZ1YBR131W 2115 nt5.32□□□□□ -1.56
TDP1P38319 HMRA1YCR097W 381 nt5.31□□□□□ -1.56
TDP1P38319 PDE1YGL248W 1110 nt5.31□□□□□ -1.56
TDP1P38319 NQM1YGR043C 1002 nt5.31□□□□□ -1.56
TDP1P38319 EGD2YHR193C 525 nt5.31□□□□□ -1.56
TDP1P38319 ELF1YKL160W 438 nt5.31□□□□□ -1.56
TDP1P38319 YLR126CYLR126C 756 nt5.31□□□□□ -1.56
TDP1P38319 SLZ1YNL196C 897 nt5.31□□□□□ -1.56
TDP1P38319 ELP2YGR200C 2367 nt5.31□□□□□ -1.56
TDP1P38319 MRK1YDL079C 1506 nt5.31□□□□□ -1.56
TDP1P38319 KAR5YMR065W 1515 nt5.31□□□□□ -1.56
TDP1P38319 OCA5YHL029C 2040 nt5.31□□□□□ -1.56
TDP1P38319 MAL13YGR288W 1422 nt5.31□□□□□ -1.56
TDP1P38319 ATG1YGL180W 2694 nt5.3□□□□□ -1.56
TDP1P38319 PPR1YLR014C 2715 nt5.3□□□□□ -1.56
TDP1P38319 IXR1YKL032C 1794 nt5.3□□□□□ -1.56
TDP1P38319 GCS1YDL226C 1059 nt5.3□□□□□ -1.56
TDP1P38319 LST7YGR057C 729 nt5.3□□□□□ -1.56
TDP1P38319 YLR202CYLR202C 327 nt5.3□□□□□ -1.56
TDP1P38319 YNL019CYNL019C 855 nt5.3□□□□□ -1.56
TDP1P38319 YNL033WYNL033W 855 nt5.3□□□□□ -1.56
TDP1P38319 NRM1YNR009W 750 nt5.3□□□□□ -1.56
TDP1P38319 MDY2YOL111C 639 nt5.3□□□□□ -1.56
TDP1P38319 PBP2YBR233W 1242 nt5.3□□□□□ -1.56
TDP1P38319 NRD1YNL251C 1728 nt5.3□□□□□ -1.56
TDP1P38319 TEF1YPR080W 1377 nt5.29□□□□□ -1.56
TDP1P38319 TEF2YBR118W 1377 nt5.29□□□□□ -1.56
TDP1P38319 SMP1YBR182C 1359 nt5.29□□□□□ -1.56
TDP1P38319 PFA5YDR459C 1125 nt5.29□□□□□ -1.56
TDP1P38319 SYF2YGR129W 648 nt5.29□□□□□ -1.56
TDP1P38319 HPM1YIL110W 1134 nt5.29□□□□□ -1.56
TDP1P38319 ERG20YJL167W 1059 nt5.29□□□□□ -1.56
TDP1P38319 TFA2YKR062W 987 nt5.29□□□□□ -1.56
TDP1P38319 SPG4YMR107W 348 nt5.29□□□□□ -1.56
TDP1P38319 SHP1YBL058W 1272 nt5.29□□□□□ -1.56
TDP1P38319 YPL073CYPL073C 486 nt5.29□□□□□ -1.56
TDP1P38319 NCE102YPR149W 522 nt5.29□□□□□ -1.56
TDP1P38319 CKS1YBR135W 453 nt5.29□□□□□ -1.56
TDP1P38319 NTH2YBR001C 2343 nt5.29□□□□□ -1.56
TDP1P38319 RRI1YDL216C 1323 nt5.28□□□□□ -1.56
TDP1P38319 SIP5YMR140W 1470 nt5.28□□□□□ -1.56
TDP1P38319 GCR2YNL199C 1605 nt5.28□□□□□ -1.56
TDP1P38319 RMD1YDL001W 1293 nt5.28□□□□□ -1.56
TDP1P38319 PEX19YDL065C 1029 nt5.28□□□□□ -1.56
TDP1P38319 GRE3YHR104W 984 nt5.28□□□□□ -1.56
TDP1P38319 NVJ1YHR195W 966 nt5.28□□□□□ -1.56
TDP1P38319 YKR041WYKR041W 753 nt5.28□□□□□ -1.56
TDP1P38319 YLR124WYLR124W 345 nt5.28□□□□□ -1.56
TDP1P38319 MRPL15YLR312W-A 762 nt5.28□□□□□ -1.56
TDP1P38319 IBD2YNL164C 1056 nt5.28□□□□□ -1.56
TDP1P38319 MPP10YJR002W 1782 nt5.28□□□□□ -1.56
TDP1P38319 YJR124CYJR124C 1347 nt5.27□□□□□ -1.57
TDP1P38319 GIP1YBR045C 1920 nt5.27□□□□□ -1.57
TDP1P38319 RPS16BYDL083C 432 nt5.27□□□□□ -1.57
TDP1P38319 LUC7YDL087C 786 nt5.27□□□□□ -1.57
TDP1P38319 YDL172CYDL172C 480 nt5.27□□□□□ -1.57
TDP1P38319 PRS2YER099C 957 nt5.27□□□□□ -1.57
TDP1P38319 YFL012WYFL012W 447 nt5.27□□□□□ -1.57
TDP1P38319 SHE10YGL228W 1734 nt5.27□□□□□ -1.57
TDP1P38319 ERG25YGR060W 930 nt5.27□□□□□ -1.57
TDP1P38319 SDA1YGR245C 2304 nt5.27□□□□□ -1.57
TDP1P38319 YAL066WYAL066W 309 nt5.27□□□□□ -1.57
TDP1P38319 YLR271WYLR271W 825 nt5.27□□□□□ -1.57
TDP1P38319 YML101C-AYML101C-A 318 nt5.27□□□□□ -1.57
TDP1P38319 PGA3YML125C 939 nt5.27□□□□□ -1.57
TDP1P38319 ECM33YBR078W 1290 nt5.27□□□□□ -1.57
TDP1P38319 MET16YPR167C 786 nt5.27□□□□□ -1.57
TDP1P38319 CBP6YBR120C 489 nt5.27□□□□□ -1.57
TDP1P38319 DRN1YGR093W 1524 nt5.27□□□□□ -1.57
TDP1P38319 HRP1YOL123W 1605 nt5.26□□□□□ -1.57
TDP1P38319 SHM1YBR263W 1473 nt5.26□□□□□ -1.57
TDP1P38319 YPK3YBR028C 1578 nt5.26□□□□□ -1.57
TDP1P38319 TED1YIL039W 1422 nt5.26□□□□□ -1.57
TDP1P38319 SOG2YOR353C 2376 nt5.26□□□□□ -1.57
TDP1P38319 HIM1YDR317W 1245 nt5.26□□□□□ -1.57
TDP1P38319 DFM1YDR411C 1026 nt5.26□□□□□ -1.57
TDP1P38319 CAD1YDR423C 1230 nt5.26□□□□□ -1.57
TDP1P38319 NDL1YLR254C 570 nt5.26□□□□□ -1.57
TDP1P38319 AAH1YNL141W 1044 nt5.26□□□□□ -1.57
TDP1P38319 YBR056C-BYBR056C-B 159 nt5.26□□□□□ -1.57
TDP1P38319 STE50YCL032W 1041 nt5.26□□□□□ -1.57
TDP1P38319 DED81YHR019C 1665 nt5.26□□□□□ -1.57
TDP1P38319 ESC2YDR363W 1371 nt5.26□□□□□ -1.57
TDP1P38319 DAK1YML070W 1755 nt5.25□□□□□ -1.57
TDP1P38319 YCR047W-AYCR047W-A 207 nt5.25□□□□□ -1.57
TDP1P38319 YDL183CYDL183C 963 nt5.25□□□□□ -1.57
TDP1P38319 CLC1YGR167W 702 nt5.25□□□□□ -1.57
TDP1P38319 YHR028W-AYHR028W-A 321 nt5.25□□□□□ -1.57
TDP1P38319 DBP8YHR169W 1296 nt5.25□□□□□ -1.57
TDP1P38319 YHR214WYHR214W 612 nt5.25□□□□□ -1.57
TDP1P38319 MTW1YAL034W-A 870 nt5.25□□□□□ -1.57
TDP1P38319 YKL091CYKL091C 933 nt5.25□□□□□ -1.57
TDP1P38319 PAU17YLL025W 375 nt5.25□□□□□ -1.57
TDP1P38319 YAR066WYAR066W 612 nt5.25□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms