Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COL8A2P25067 AC138932.3-201ENST00000567634 1902 ntBASIC19.27■□□□□ 0.68
COL8A2P25067 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.27■□□□□ 0.68
COL8A2P25067 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
COL8A2P25067 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL8A2P25067 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL8A2P25067 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL8A2P25067 MIR638-201ENST00000385237 100 ntBASIC19.26■□□□□ 0.67
COL8A2P25067 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
COL8A2P25067 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.26■□□□□ 0.67
COL8A2P25067 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.26■□□□□ 0.67
COL8A2P25067 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL8A2P25067 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL8A2P25067 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL8A2P25067 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL8A2P25067 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.25■□□□□ 0.67
COL8A2P25067 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL8A2P25067 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.25■□□□□ 0.67
COL8A2P25067 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL8A2P25067 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL8A2P25067 AC142381.3-201ENST00000568208 1670 ntBASIC19.24■□□□□ 0.67
COL8A2P25067 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.24■□□□□ 0.67
COL8A2P25067 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.24■□□□□ 0.67
COL8A2P25067 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
COL8A2P25067 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COL8A2P25067 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL8A2P25067 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL8A2P25067 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL8A2P25067 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.24■□□□□ 0.67
COL8A2P25067 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.23■□□□□ 0.67
COL8A2P25067 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL8A2P25067 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL8A2P25067 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL8A2P25067 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.23■□□□□ 0.67
COL8A2P25067 SRD5A1P1-201ENST00000442297 786 ntBASIC19.23■□□□□ 0.67
COL8A2P25067 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.23■□□□□ 0.67
COL8A2P25067 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL8A2P25067 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.23■□□□□ 0.67
COL8A2P25067 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL8A2P25067 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL8A2P25067 AC093323.1-202ENST00000635031 2045 ntBASIC19.22■□□□□ 0.67
COL8A2P25067 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL8A2P25067 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL8A2P25067 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL8A2P25067 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL8A2P25067 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.22■□□□□ 0.67
COL8A2P25067 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.22■□□□□ 0.67
COL8A2P25067 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COL8A2P25067 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL8A2P25067 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL8A2P25067 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL8A2P25067 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL8A2P25067 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL8A2P25067 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL8A2P25067 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL8A2P25067 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL8A2P25067 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL8A2P25067 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL8A2P25067 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL8A2P25067 UNC93B3-201ENST00000308076 687 ntBASIC19.21■□□□□ 0.67
COL8A2P25067 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL8A2P25067 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COL8A2P25067 AL161729.1-201ENST00000604104 1402 ntBASIC19.21■□□□□ 0.67
COL8A2P25067 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL8A2P25067 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL8A2P25067 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.2■□□□□ 0.66
COL8A2P25067 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL8A2P25067 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.2■□□□□ 0.66
COL8A2P25067 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.19■□□□□ 0.66
COL8A2P25067 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL8A2P25067 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
COL8A2P25067 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.19■□□□□ 0.66
COL8A2P25067 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.19■□□□□ 0.66
COL8A2P25067 PBX2P1-201ENST00000493219 1291 ntBASIC19.19■□□□□ 0.66
COL8A2P25067 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL8A2P25067 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL8A2P25067 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
COL8A2P25067 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL8A2P25067 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.18■□□□□ 0.66
COL8A2P25067 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL8A2P25067 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL8A2P25067 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL8A2P25067 AC005837.3-201ENST00000612163 286 ntBASIC19.18■□□□□ 0.66
COL8A2P25067 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL8A2P25067 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL8A2P25067 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.18■□□□□ 0.66
COL8A2P25067 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL8A2P25067 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL8A2P25067 AC009102.2-201ENST00000606772 1639 ntBASIC19.18■□□□□ 0.66
COL8A2P25067 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL8A2P25067 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL8A2P25067 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms