Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
KCNA3P22001 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.43■■■□□ 2.14
KCNA3P22001 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.43■■■□□ 2.14
KCNA3P22001 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
KCNA3P22001 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.43■■■□□ 2.14
KCNA3P22001 MIR6084-201ENST00000622012 110 ntBASIC28.43■■■□□ 2.14
KCNA3P22001 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
KCNA3P22001 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
KCNA3P22001 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
KCNA3P22001 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.42■■■□□ 2.14
KCNA3P22001 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
KCNA3P22001 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
KCNA3P22001 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
KCNA3P22001 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
KCNA3P22001 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.41■■■□□ 2.14
KCNA3P22001 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
KCNA3P22001 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
KCNA3P22001 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNA3P22001 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
KCNA3P22001 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNA3P22001 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
KCNA3P22001 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
KCNA3P22001 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
KCNA3P22001 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNA3P22001 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
KCNA3P22001 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
KCNA3P22001 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.39■■■□□ 2.14
KCNA3P22001 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.39■■■□□ 2.14
KCNA3P22001 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
KCNA3P22001 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
KCNA3P22001 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
KCNA3P22001 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.38■■■□□ 2.13
KCNA3P22001 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
KCNA3P22001 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.38■■■□□ 2.13
KCNA3P22001 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC28.38■■■□□ 2.13
KCNA3P22001 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.38■■■□□ 2.13
KCNA3P22001 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.38■■■□□ 2.13
KCNA3P22001 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
KCNA3P22001 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
KCNA3P22001 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.37■■■□□ 2.13
KCNA3P22001 MIR572-201ENST00000384983 95 ntBASIC28.37■■■□□ 2.13
KCNA3P22001 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC28.37■■■□□ 2.13
KCNA3P22001 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
KCNA3P22001 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
KCNA3P22001 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
KCNA3P22001 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
KCNA3P22001 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.36■■■□□ 2.13
KCNA3P22001 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.36■■■□□ 2.13
KCNA3P22001 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.36■■■□□ 2.13
KCNA3P22001 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
KCNA3P22001 TERF1P2-201ENST00000583350 1212 ntBASIC28.36■■■□□ 2.13
KCNA3P22001 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.36■■■□□ 2.13
KCNA3P22001 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
KCNA3P22001 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.36■■■□□ 2.13
KCNA3P22001 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
KCNA3P22001 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.35■■■□□ 2.13
KCNA3P22001 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.35■■■□□ 2.13
KCNA3P22001 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.35■■■□□ 2.13
KCNA3P22001 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.35■■■□□ 2.13
KCNA3P22001 AC012414.1-201ENST00000556676 535 ntBASIC28.35■■■□□ 2.13
KCNA3P22001 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
KCNA3P22001 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.35■■■□□ 2.13
KCNA3P22001 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
KCNA3P22001 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.34■■■□□ 2.13
KCNA3P22001 KRT18P14-201ENST00000534205 1250 ntBASIC28.34■■■□□ 2.13
KCNA3P22001 pRNA.6-201ENST00000610482 90 ntBASIC28.34■■■□□ 2.13
KCNA3P22001 pRNA.5-201ENST00000612139 90 ntBASIC28.34■■■□□ 2.13
KCNA3P22001 pRNA.11-201ENST00000618423 90 ntBASIC28.34■■■□□ 2.13
KCNA3P22001 pRNA.13-201ENST00000619112 90 ntBASIC28.34■■■□□ 2.13
KCNA3P22001 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
KCNA3P22001 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC28.34■■■□□ 2.13
KCNA3P22001 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
KCNA3P22001 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.33■■■□□ 2.13
KCNA3P22001 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
KCNA3P22001 TK2-208ENST00000545043 1120 ntTSL 2 BASIC28.33■■■□□ 2.13
KCNA3P22001 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.33■■■□□ 2.13
KCNA3P22001 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.32■■■□□ 2.12
KCNA3P22001 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.32■■■□□ 2.12
KCNA3P22001 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
KCNA3P22001 RAP2CP1-201ENST00000605103 478 ntBASIC28.32■■■□□ 2.12
KCNA3P22001 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.32■■■□□ 2.12
KCNA3P22001 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
KCNA3P22001 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
KCNA3P22001 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.31■■■□□ 2.12
KCNA3P22001 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
KCNA3P22001 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.31■■■□□ 2.12
KCNA3P22001 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.31■■■□□ 2.12
KCNA3P22001 IGHV3-19-201ENST00000521488 291 ntBASIC28.31■■■□□ 2.12
KCNA3P22001 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.31■■■□□ 2.12
KCNA3P22001 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
KCNA3P22001 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
KCNA3P22001 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
KCNA3P22001 ESRRAP2-201ENST00000418437 1549 ntBASIC28.31■■■□□ 2.12
KCNA3P22001 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
KCNA3P22001 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
KCNA3P22001 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KCNA3P22001 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
KCNA3P22001 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
KCNA3P22001 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
KCNA3P22001 AL354811.1-201ENST00000610286 706 ntBASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms