Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H1DP16402 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HIST1H1DP16402 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
HIST1H1DP16402 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HIST1H1DP16402 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HIST1H1DP16402 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H1DP16402 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST1H1DP16402 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HIST1H1DP16402 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H1DP16402 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1DP16402 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H1DP16402 AL592295.1-201ENST00000400984 884 ntBASIC19.31■□□□□ 0.68
HIST1H1DP16402 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1DP16402 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HIST1H1DP16402 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST1H1DP16402 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HIST1H1DP16402 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1DP16402 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1DP16402 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST1H1DP16402 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST1H1DP16402 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST1H1DP16402 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1DP16402 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1DP16402 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1DP16402 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1DP16402 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1DP16402 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1DP16402 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1DP16402 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1DP16402 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1DP16402 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HIST1H1DP16402 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HIST1H1DP16402 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1DP16402 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1DP16402 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1DP16402 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
HIST1H1DP16402 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1DP16402 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1DP16402 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1DP16402 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1DP16402 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1DP16402 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1DP16402 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1DP16402 AL022069.1-201ENST00000568025 1636 ntBASIC19.28■□□□□ 0.68
HIST1H1DP16402 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST1H1DP16402 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1DP16402 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HIST1H1DP16402 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.27■□□□□ 0.68
HIST1H1DP16402 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
HIST1H1DP16402 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H1DP16402 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H1DP16402 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.27■□□□□ 0.68
HIST1H1DP16402 AC018755.3-202ENST00000596210 929 ntBASIC19.27■□□□□ 0.68
HIST1H1DP16402 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H1DP16402 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.27■□□□□ 0.67
HIST1H1DP16402 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIST1H1DP16402 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.27■□□□□ 0.67
HIST1H1DP16402 LINC00565-201ENST00000562710 2331 ntBASIC19.26■□□□□ 0.67
HIST1H1DP16402 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 GUSBP5-202ENST00000510805 1989 ntBASIC19.26■□□□□ 0.67
HIST1H1DP16402 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HIST1H1DP16402 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1DP16402 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1DP16402 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HIST1H1DP16402 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1DP16402 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1DP16402 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1DP16402 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HIST1H1DP16402 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.25■□□□□ 0.67
HIST1H1DP16402 AC087393.1-201ENST00000582896 145 ntBASIC19.25■□□□□ 0.67
HIST1H1DP16402 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.25■□□□□ 0.67
HIST1H1DP16402 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HIST1H1DP16402 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1DP16402 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HIST1H1DP16402 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1DP16402 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1DP16402 LINC00526-201ENST00000581067 1875 ntBASIC19.24■□□□□ 0.67
HIST1H1DP16402 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1DP16402 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.24■□□□□ 0.67
HIST1H1DP16402 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HIST1H1DP16402 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1DP16402 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1DP16402 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HIST1H1DP16402 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1DP16402 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1DP16402 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1DP16402 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.24■□□□□ 0.67
HIST1H1DP16402 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1DP16402 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1DP16402 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HIST1H1DP16402 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms