Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PF4V1P10720 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PF4V1P10720 MIR638-201ENST00000385237 100 ntBASIC17.98■□□□□ 0.47
PF4V1P10720 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.98■□□□□ 0.47
PF4V1P10720 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.98■□□□□ 0.47
PF4V1P10720 SNX5-217ENST00000606557 1087 ntBASIC17.98■□□□□ 0.47
PF4V1P10720 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PF4V1P10720 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PF4V1P10720 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PF4V1P10720 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.98■□□□□ 0.47
PF4V1P10720 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.98■□□□□ 0.47
PF4V1P10720 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PF4V1P10720 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PF4V1P10720 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.97■□□□□ 0.47
PF4V1P10720 AC004448.1-201ENST00000458332 883 ntBASIC17.97■□□□□ 0.47
PF4V1P10720 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.97■□□□□ 0.47
PF4V1P10720 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PF4V1P10720 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.97■□□□□ 0.47
PF4V1P10720 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PF4V1P10720 AC131274.2-201ENST00000580697 1507 ntBASIC17.97■□□□□ 0.47
PF4V1P10720 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PF4V1P10720 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PF4V1P10720 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PF4V1P10720 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PF4V1P10720 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PF4V1P10720 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PF4V1P10720 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PF4V1P10720 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PF4V1P10720 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.96■□□□□ 0.47
PF4V1P10720 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PF4V1P10720 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PF4V1P10720 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PF4V1P10720 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.96■□□□□ 0.47
PF4V1P10720 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PF4V1P10720 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PF4V1P10720 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.96■□□□□ 0.46
PF4V1P10720 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PF4V1P10720 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PF4V1P10720 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PF4V1P10720 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PF4V1P10720 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PF4V1P10720 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PF4V1P10720 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PF4V1P10720 AC096631.2-201ENST00000436136 790 ntBASIC17.95■□□□□ 0.46
PF4V1P10720 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PF4V1P10720 LINC01124-201ENST00000409786 2117 ntBASIC17.95■□□□□ 0.46
PF4V1P10720 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PF4V1P10720 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.94■□□□□ 0.46
PF4V1P10720 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PF4V1P10720 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PF4V1P10720 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PF4V1P10720 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PF4V1P10720 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PF4V1P10720 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.94■□□□□ 0.46
PF4V1P10720 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.94■□□□□ 0.46
PF4V1P10720 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PF4V1P10720 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PF4V1P10720 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PF4V1P10720 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PF4V1P10720 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PF4V1P10720 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.94■□□□□ 0.46
PF4V1P10720 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PF4V1P10720 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PF4V1P10720 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PF4V1P10720 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PF4V1P10720 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.93■□□□□ 0.46
PF4V1P10720 AL161729.1-201ENST00000604104 1402 ntBASIC17.93■□□□□ 0.46
PF4V1P10720 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PF4V1P10720 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.93■□□□□ 0.46
PF4V1P10720 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.93■□□□□ 0.46
PF4V1P10720 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PF4V1P10720 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PF4V1P10720 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PF4V1P10720 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PF4V1P10720 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.92■□□□□ 0.46
PF4V1P10720 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PF4V1P10720 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PF4V1P10720 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PF4V1P10720 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PF4V1P10720 MIR4466-201ENST00000606121 54 ntBASIC17.92■□□□□ 0.46
PF4V1P10720 MIR6722-201ENST00000617286 78 ntBASIC17.92■□□□□ 0.46
PF4V1P10720 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PF4V1P10720 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.92■□□□□ 0.46
PF4V1P10720 AL139125.2-201ENST00000623134 1869 ntBASIC17.92■□□□□ 0.46
PF4V1P10720 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PF4V1P10720 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PF4V1P10720 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PF4V1P10720 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.91■□□□□ 0.46
PF4V1P10720 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PF4V1P10720 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PF4V1P10720 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PF4V1P10720 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms