Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YML045W-AYML045W-A 1323 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 PRM6YML047C 1059 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 YMR051CYMR051C 1323 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 YNL054W-AYNL054W-A 1323 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 YNL122CYNL122C 348 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 YOL103W-AYOL103W-A 1323 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 CBP3YPL215W 1008 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 YPL257W-AYPL257W-A 1323 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 YPR137C-AYPR137C-A 1323 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 YPR158C-CYPR158C-C 1323 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 VPS4YPR173C 1314 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 BEM1YBR200W 1656 nt7.14□□□□□ -1.27
TY1A-PR2P0CX60 CTF3YLR381W 2202 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 FRE5YOR384W 2085 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 NDE1YMR145C 1683 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 GAS5YOL030W 1455 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 YMR034CYMR034C 1305 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 YCP4YCR004C 744 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 ESS1YJR017C 513 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 XYL2YLR070C 1071 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 YNL337WYNL337W 255 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 TRM1YDR120C 1713 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 ADE2YOR128C 1716 nt7.13□□□□□ -1.27
TY1A-PR2P0CX60 SRV2YNL138W 1581 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 GDI1YER136W 1356 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 YOR192C-AYOR192C-A 1317 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 YOR343W-AYOR343W-A 1317 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 YCR018C-AYCR018C-A 255 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 RHB1YCR027C 630 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 ERP3YDL018C 678 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 YER133W-AYER133W-A 342 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 YGL109WYGL109W 324 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 RTT102YGR275W 474 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 LOH1YJL038C 660 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 GAL3YDR009W 1563 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 HAL5YJL165C 2568 nt7.12□□□□□ -1.27
TY1A-PR2P0CX60 TPS1YBR126C 1488 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 RAD57YDR004W 1383 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 SLD2YKL108W 1362 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 MSW1YDR268W 1140 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 MEI4YER044C-A 1227 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 AGA2YGL032C 264 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 YGR064WYGR064W 369 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 THP2YHR167W 786 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 SFT1YKL006C-A 294 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 YKL063CYKL063C 504 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 ENV10YLR065C 546 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 POP7YBR167C 423 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 PCL8YPL219W 1479 nt7.11□□□□□ -1.27
TY1A-PR2P0CX60 UBX3YDL091C 1368 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 ENT1YDL161W 1365 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 ESA1YOR244W 1338 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 RPL13AYDL082W 600 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 TRM8YDL201W 861 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 AGE2YIL044C 897 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 VPH2YKL119C 648 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 YKR073CYKR073C 321 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 YMR316C-BYMR316C-B 309 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 GPI15YNL038W 690 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 ATO2YNR002C 849 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 YBL094CYBL094C 333 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 YNR064CYNR064C 873 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 RRG7YOR305W 729 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 RET3YPL010W 570 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 YPL113CYPL113C 1191 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 CMR1YDL156W 1569 nt7.1□□□□□ -1.27
TY1A-PR2P0CX60 KGD2YDR148C 1392 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 LTV1YKL143W 1392 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 NOP7YGR103W 1818 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 YIL108WYIL108W 2091 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 CDC50YCR094W 1176 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 YJL193WYJL193W 1209 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 MDE1YJR024C 735 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 YLR124WYLR124W 345 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 TMA23YMR269W 636 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 RCN2YOR220W 798 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 RFS1YBR052C 633 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 YPL264CYPL264C 1062 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 CDC28YBR160W 897 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 RPS9BYBR189W 588 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 KEL3YPL263C 1956 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 HXT9YJL219W 1704 nt7.09□□□□□ -1.27
TY1A-PR2P0CX60 RTT106YNL206C 1368 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 YMD8YML038C 1329 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 snR86snR86 1004 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 SPG3YDR504C 384 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 UBC6YER100W 753 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 SPT15YER148W 723 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 SNO3YFL060C 669 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 OST5YGL226C-A 261 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 FLX1YIL134W 936 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 TPK1YJL164C 1194 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 YNL144W-AYNL144W-A 84 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 SNO2YNL334C 669 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 LEE1YPL054W 906 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 RFC5YBR087W 1065 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 CCR4YAL021C 2514 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 OST1YJL002C 1431 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 RBS1YDL189W 1374 nt7.08□□□□□ -1.28
TY1A-PR2P0CX60 RGT2YDL138W 2292 nt7.07□□□□□ -1.28
Retrieved 100 of 7,029 protein–RNA pairs in 23.2 ms