Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RAB40ALP0C0E4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB40ALP0C0E4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB40ALP0C0E4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB40ALP0C0E4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB40ALP0C0E4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB40ALP0C0E4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.5■■□□□ 1.03
RAB40ALP0C0E4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB40ALP0C0E4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAB40ALP0C0E4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB40ALP0C0E4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAB40ALP0C0E4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB40ALP0C0E4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB40ALP0C0E4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB40ALP0C0E4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 SYT6-210ENST00000641643 1587 ntBASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40ALP0C0E4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
RAB40ALP0C0E4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB40ALP0C0E4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RAB40ALP0C0E4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB40ALP0C0E4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB40ALP0C0E4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 AC009102.2-201ENST00000606772 1639 ntBASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB40ALP0C0E4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB40ALP0C0E4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 AL138724.1-201ENST00000606771 1088 ntBASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40ALP0C0E4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RAB40ALP0C0E4 ZNRF2P3-201ENST00000424200 374 ntBASIC21.42■■□□□ 1.02
RAB40ALP0C0E4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RAB40ALP0C0E4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB40ALP0C0E4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 AC099791.2-201ENST00000605725 427 ntBASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 AC241377.3-202ENST00000626088 1088 ntBASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 AC241585.3-202ENST00000628937 1088 ntBASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 AC245100.8-202ENST00000629247 1058 ntBASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB40ALP0C0E4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 C17orf82-201ENST00000623772 1530 ntBASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 AL136967.2-201ENST00000623968 743 ntBASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms