Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.42■□□□□ 0.7
ACAA1P09110 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.42■□□□□ 0.7
ACAA1P09110 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 RARRES2P1-201ENST00000474487 481 ntBASIC19.42■□□□□ 0.7
ACAA1P09110 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.42■□□□□ 0.7
ACAA1P09110 MIR4281-201ENST00000580852 62 ntBASIC19.42■□□□□ 0.7
ACAA1P09110 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
ACAA1P09110 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACAA1P09110 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACAA1P09110 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.41■□□□□ 0.7
ACAA1P09110 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACAA1P09110 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.41■□□□□ 0.7
ACAA1P09110 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.41■□□□□ 0.7
ACAA1P09110 AL031848.2-201ENST00000607670 837 ntBASIC19.41■□□□□ 0.7
ACAA1P09110 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ACAA1P09110 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACAA1P09110 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACAA1P09110 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACAA1P09110 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACAA1P09110 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACAA1P09110 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACAA1P09110 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACAA1P09110 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ACAA1P09110 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.4■□□□□ 0.7
ACAA1P09110 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACAA1P09110 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACAA1P09110 AC131274.2-201ENST00000580697 1507 ntBASIC19.4■□□□□ 0.7
ACAA1P09110 AF131216.4-201ENST00000638924 1588 ntBASIC19.4■□□□□ 0.7
ACAA1P09110 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACAA1P09110 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACAA1P09110 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ACAA1P09110 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACAA1P09110 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACAA1P09110 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACAA1P09110 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.39■□□□□ 0.69
ACAA1P09110 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACAA1P09110 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACAA1P09110 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.38■□□□□ 0.69
ACAA1P09110 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.38■□□□□ 0.69
ACAA1P09110 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACAA1P09110 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACAA1P09110 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ACAA1P09110 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.37■□□□□ 0.69
ACAA1P09110 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.37■□□□□ 0.69
ACAA1P09110 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACAA1P09110 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACAA1P09110 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ACAA1P09110 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACAA1P09110 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACAA1P09110 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACAA1P09110 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACAA1P09110 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ACAA1P09110 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACAA1P09110 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACAA1P09110 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACAA1P09110 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACAA1P09110 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ACAA1P09110 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.35■□□□□ 0.69
ACAA1P09110 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACAA1P09110 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.35■□□□□ 0.69
ACAA1P09110 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.35■□□□□ 0.69
ACAA1P09110 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACAA1P09110 ABCB10P4-201ENST00000566803 2184 ntBASIC19.34■□□□□ 0.69
ACAA1P09110 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACAA1P09110 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ACAA1P09110 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACAA1P09110 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ACAA1P09110 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ACAA1P09110 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACAA1P09110 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.34■□□□□ 0.69
ACAA1P09110 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.34■□□□□ 0.69
ACAA1P09110 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.34■□□□□ 0.69
ACAA1P09110 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACAA1P09110 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ACAA1P09110 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACAA1P09110 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACAA1P09110 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ACAA1P09110 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACAA1P09110 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACAA1P09110 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms