Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HTR1AP08908 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.8■□□□□ 0.92
HTR1AP08908 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTR1AP08908 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTR1AP08908 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR1AP08908 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR1AP08908 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTR1AP08908 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.8■□□□□ 0.92
HTR1AP08908 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR1AP08908 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR1AP08908 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.79■□□□□ 0.92
HTR1AP08908 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR1AP08908 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR1AP08908 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.79■□□□□ 0.92
HTR1AP08908 MIR3648-2-201ENST00000581792 180 ntBASIC20.79■□□□□ 0.92
HTR1AP08908 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.79■□□□□ 0.92
HTR1AP08908 MIR3648-1-201ENST00000615959 180 ntBASIC20.79■□□□□ 0.92
HTR1AP08908 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR1AP08908 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.79■□□□□ 0.92
HTR1AP08908 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR1AP08908 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR1AP08908 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTR1AP08908 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR1AP08908 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTR1AP08908 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.78■□□□□ 0.92
HTR1AP08908 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.78■□□□□ 0.92
HTR1AP08908 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.78■□□□□ 0.92
HTR1AP08908 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.78■□□□□ 0.92
HTR1AP08908 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.78■□□□□ 0.92
HTR1AP08908 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTR1AP08908 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTR1AP08908 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR1AP08908 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR1AP08908 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR1AP08908 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HTR1AP08908 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HTR1AP08908 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
HTR1AP08908 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.77■□□□□ 0.91
HTR1AP08908 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HTR1AP08908 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTR1AP08908 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTR1AP08908 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.76■□□□□ 0.91
HTR1AP08908 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTR1AP08908 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTR1AP08908 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.76■□□□□ 0.91
HTR1AP08908 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR1AP08908 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR1AP08908 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.75■□□□□ 0.91
HTR1AP08908 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR1AP08908 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.75■□□□□ 0.91
HTR1AP08908 MIR3960-201ENST00000583311 91 ntBASIC20.75■□□□□ 0.91
HTR1AP08908 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HTR1AP08908 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR1AP08908 SLC25A24-204ENST00000569674 2357 ntBASIC20.75■□□□□ 0.91
HTR1AP08908 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTR1AP08908 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTR1AP08908 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTR1AP08908 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTR1AP08908 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HTR1AP08908 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.74■□□□□ 0.91
HTR1AP08908 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HTR1AP08908 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
HTR1AP08908 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR1AP08908 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR1AP08908 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR1AP08908 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HTR1AP08908 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.74■□□□□ 0.91
HTR1AP08908 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
HTR1AP08908 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR1AP08908 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HTR1AP08908 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTR1AP08908 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTR1AP08908 ABHD17AP4-201ENST00000411545 909 ntBASIC20.73■□□□□ 0.91
HTR1AP08908 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.73■□□□□ 0.91
HTR1AP08908 AL157400.5-201ENST00000507624 621 ntBASIC20.73■□□□□ 0.91
HTR1AP08908 AC025884.2-201ENST00000553429 711 ntBASIC20.73■□□□□ 0.91
HTR1AP08908 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTR1AP08908 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HTR1AP08908 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.73■□□□□ 0.91
HTR1AP08908 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.72■□□□□ 0.91
HTR1AP08908 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.72■□□□□ 0.91
HTR1AP08908 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.72■□□□□ 0.91
HTR1AP08908 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HTR1AP08908 AC016575.1-201ENST00000607026 382 ntBASIC20.72■□□□□ 0.91
HTR1AP08908 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
HTR1AP08908 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR1AP08908 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTR1AP08908 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.71■□□□□ 0.91
HTR1AP08908 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms