Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KRT18P5-201ENST00000436075 1291 ntBASIC24.37■■□□□ 1.49
RB1P06400 IKBKGP1-201ENST00000612193 1073 ntBASIC24.37■■□□□ 1.49
RB1P06400 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RB1P06400 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RB1P06400 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.36■■□□□ 1.49
RB1P06400 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RB1P06400 SLC47A1P1-202ENST00000449666 945 ntBASIC24.36■■□□□ 1.49
RB1P06400 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.36■■□□□ 1.49
RB1P06400 MIR6089-201ENST00000616698 64 ntBASIC24.36■■□□□ 1.49
RB1P06400 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.36■■□□□ 1.49
RB1P06400 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RB1P06400 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.35■■□□□ 1.49
RB1P06400 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RB1P06400 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RB1P06400 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.35■■□□□ 1.49
RB1P06400 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RB1P06400 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
RB1P06400 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RB1P06400 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RB1P06400 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RB1P06400 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RB1P06400 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.34■■□□□ 1.49
RB1P06400 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.34■■□□□ 1.49
RB1P06400 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.34■■□□□ 1.49
RB1P06400 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.34■■□□□ 1.49
RB1P06400 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.34■■□□□ 1.49
RB1P06400 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RB1P06400 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RB1P06400 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
RB1P06400 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
RB1P06400 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RB1P06400 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RB1P06400 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.33■■□□□ 1.49
RB1P06400 AC123595.1-201ENST00000440769 1046 ntBASIC24.33■■□□□ 1.49
RB1P06400 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RB1P06400 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.33■■□□□ 1.49
RB1P06400 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.33■■□□□ 1.49
RB1P06400 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
RB1P06400 AL358852.1-201ENST00000623174 1268 ntBASIC24.33■■□□□ 1.49
RB1P06400 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.33■■□□□ 1.48
RB1P06400 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RB1P06400 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.32■■□□□ 1.48
RB1P06400 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RB1P06400 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.32■■□□□ 1.48
RB1P06400 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.32■■□□□ 1.48
RB1P06400 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.32■■□□□ 1.48
RB1P06400 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.32■■□□□ 1.48
RB1P06400 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.32■■□□□ 1.48
RB1P06400 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RB1P06400 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RB1P06400 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.32■■□□□ 1.48
RB1P06400 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RB1P06400 DUX4L2-201ENST00000561772 1275 ntBASIC24.31■■□□□ 1.48
RB1P06400 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.31■■□□□ 1.48
RB1P06400 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RB1P06400 pRNA.6-201ENST00000610482 90 ntBASIC24.31■■□□□ 1.48
RB1P06400 pRNA.5-201ENST00000612139 90 ntBASIC24.31■■□□□ 1.48
RB1P06400 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.31■■□□□ 1.48
RB1P06400 pRNA.11-201ENST00000618423 90 ntBASIC24.31■■□□□ 1.48
RB1P06400 pRNA.13-201ENST00000619112 90 ntBASIC24.31■■□□□ 1.48
RB1P06400 DUX4L6-201ENST00000626483 1275 ntBASIC24.31■■□□□ 1.48
RB1P06400 DUX4L1-201ENST00000627662 1275 ntBASIC24.31■■□□□ 1.48
RB1P06400 DUX4L8-201ENST00000629013 1275 ntBASIC24.31■■□□□ 1.48
RB1P06400 DUX4L3-201ENST00000630187 1275 ntBASIC24.31■■□□□ 1.48
RB1P06400 DUX4L7-201ENST00000630678 1275 ntBASIC24.31■■□□□ 1.48
RB1P06400 DUX4L5-201ENST00000630834 1275 ntBASIC24.31■■□□□ 1.48
RB1P06400 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.31■■□□□ 1.48
RB1P06400 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.31■■□□□ 1.48
RB1P06400 TSPY26P-201ENST00000476365 1326 ntBASIC24.31■■□□□ 1.48
RB1P06400 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RB1P06400 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
RB1P06400 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RB1P06400 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.3■■□□□ 1.48
RB1P06400 SLC6A10P-202ENST00000431994 2058 ntBASIC24.3■■□□□ 1.48
RB1P06400 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
RB1P06400 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
RB1P06400 AC027612.3-201ENST00000413684 1047 ntBASIC24.3■■□□□ 1.48
RB1P06400 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RB1P06400 AL031602.1-201ENST00000633169 911 ntBASIC24.3■■□□□ 1.48
RB1P06400 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.3■■□□□ 1.48
RB1P06400 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RB1P06400 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RB1P06400 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
RB1P06400 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
RB1P06400 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.29■■□□□ 1.48
RB1P06400 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.29■■□□□ 1.48
RB1P06400 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
RB1P06400 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RB1P06400 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.29■■□□□ 1.48
RB1P06400 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RB1P06400 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RB1P06400 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RB1P06400 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RB1P06400 AL161729.1-201ENST00000604104 1402 ntBASIC24.28■■□□□ 1.48
RB1P06400 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RB1P06400 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
RB1P06400 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RB1P06400 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.28■■□□□ 1.48
RB1P06400 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RB1P06400 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms