Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFNA1P01562 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFNA1P01562 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFNA1P01562 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFNA1P01562 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.03■□□□□ 0.48
IFNA1P01562 DUSP8P3-201ENST00000399571 1760 ntBASIC18.03■□□□□ 0.48
IFNA1P01562 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFNA1P01562 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFNA1P01562 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.02■□□□□ 0.48
IFNA1P01562 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
IFNA1P01562 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.02■□□□□ 0.48
IFNA1P01562 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IFNA1P01562 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFNA1P01562 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.02■□□□□ 0.48
IFNA1P01562 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
IFNA1P01562 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
IFNA1P01562 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
IFNA1P01562 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
IFNA1P01562 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
IFNA1P01562 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
IFNA1P01562 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.01■□□□□ 0.47
IFNA1P01562 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
IFNA1P01562 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
IFNA1P01562 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.01■□□□□ 0.47
IFNA1P01562 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFNA1P01562 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
IFNA1P01562 AC007375.3-201ENST00000600936 2314 ntBASIC18■□□□□ 0.47
IFNA1P01562 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18■□□□□ 0.47
IFNA1P01562 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFNA1P01562 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
IFNA1P01562 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
IFNA1P01562 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFNA1P01562 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
IFNA1P01562 AL359258.2-201ENST00000564063 1566 ntBASIC18■□□□□ 0.47
IFNA1P01562 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
IFNA1P01562 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
IFNA1P01562 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.99■□□□□ 0.47
IFNA1P01562 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 AC092068.2-201ENST00000590491 1708 ntBASIC17.99■□□□□ 0.47
IFNA1P01562 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
IFNA1P01562 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.99■□□□□ 0.47
IFNA1P01562 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFNA1P01562 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFNA1P01562 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
IFNA1P01562 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
IFNA1P01562 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFNA1P01562 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFNA1P01562 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IFNA1P01562 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
IFNA1P01562 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFNA1P01562 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.98■□□□□ 0.47
IFNA1P01562 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFNA1P01562 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
IFNA1P01562 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFNA1P01562 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.98■□□□□ 0.47
IFNA1P01562 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFNA1P01562 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
IFNA1P01562 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFNA1P01562 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
IFNA1P01562 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
IFNA1P01562 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IFNA1P01562 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.97■□□□□ 0.47
IFNA1P01562 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IFNA1P01562 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.97■□□□□ 0.47
IFNA1P01562 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.97■□□□□ 0.47
IFNA1P01562 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.96■□□□□ 0.47
IFNA1P01562 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 AC138932.1-201ENST00000534164 6830 ntBASIC17.96■□□□□ 0.47
IFNA1P01562 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
IFNA1P01562 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.96■□□□□ 0.47
IFNA1P01562 SUZ12P1-203ENST00000578195 985 ntBASIC17.96■□□□□ 0.47
IFNA1P01562 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
IFNA1P01562 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFNA1P01562 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.96■□□□□ 0.47
IFNA1P01562 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms