Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOMM40O96008 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TOMM40O96008 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TOMM40O96008 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOMM40O96008 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.75■□□□□ 0.43
TOMM40O96008 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TOMM40O96008 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TOMM40O96008 AC022616.5-201ENST00000518796 181 ntBASIC17.75■□□□□ 0.43
TOMM40O96008 AC019171.1-201ENST00000601251 1056 ntBASIC17.75■□□□□ 0.43
TOMM40O96008 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOMM40O96008 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOMM40O96008 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOMM40O96008 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.74■□□□□ 0.43
TOMM40O96008 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOMM40O96008 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOMM40O96008 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOMM40O96008 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOMM40O96008 AC139795.1-202ENST00000500444 432 ntBASIC17.74■□□□□ 0.43
TOMM40O96008 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.74■□□□□ 0.43
TOMM40O96008 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOMM40O96008 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOMM40O96008 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TOMM40O96008 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TOMM40O96008 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOMM40O96008 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOMM40O96008 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOMM40O96008 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.73■□□□□ 0.43
TOMM40O96008 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOMM40O96008 ABHD17AP5-201ENST00000580133 923 ntBASIC17.73■□□□□ 0.43
TOMM40O96008 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.73■□□□□ 0.43
TOMM40O96008 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOMM40O96008 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.72■□□□□ 0.43
TOMM40O96008 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.72■□□□□ 0.43
TOMM40O96008 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.72■□□□□ 0.43
TOMM40O96008 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.72■□□□□ 0.43
TOMM40O96008 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOMM40O96008 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
TOMM40O96008 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
TOMM40O96008 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.71■□□□□ 0.43
TOMM40O96008 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
TOMM40O96008 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
TOMM40O96008 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TOMM40O96008 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TOMM40O96008 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TOMM40O96008 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.7■□□□□ 0.42
TOMM40O96008 ANOS2P-203ENST00000472227 1816 ntBASIC17.7■□□□□ 0.42
TOMM40O96008 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
TOMM40O96008 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 NTF6A-201ENST00000591175 560 ntBASIC17.7■□□□□ 0.42
TOMM40O96008 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.7■□□□□ 0.42
TOMM40O96008 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.7■□□□□ 0.42
TOMM40O96008 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.7■□□□□ 0.42
TOMM40O96008 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOMM40O96008 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOMM40O96008 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.69■□□□□ 0.42
TOMM40O96008 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOMM40O96008 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TOMM40O96008 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.69■□□□□ 0.42
TOMM40O96008 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.69■□□□□ 0.42
TOMM40O96008 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TOMM40O96008 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TOMM40O96008 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.69■□□□□ 0.42
TOMM40O96008 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOMM40O96008 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TOMM40O96008 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TOMM40O96008 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.69■□□□□ 0.42
TOMM40O96008 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOMM40O96008 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TOMM40O96008 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOMM40O96008 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOMM40O96008 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOMM40O96008 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TOMM40O96008 DUX4L18-201ENST00000553347 1267 ntBASIC17.68■□□□□ 0.42
TOMM40O96008 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.68■□□□□ 0.42
TOMM40O96008 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms