Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SFT2D2O95562 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SFT2D2O95562 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SFT2D2O95562 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SFT2D2O95562 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SFT2D2O95562 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SFT2D2O95562 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SFT2D2O95562 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SFT2D2O95562 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.88■□□□□ 0.61
SFT2D2O95562 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SFT2D2O95562 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFT2D2O95562 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFT2D2O95562 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.88■□□□□ 0.61
SFT2D2O95562 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFT2D2O95562 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFT2D2O95562 PKD1P6-201ENST00000343738 4769 ntBASIC18.87■□□□□ 0.61
SFT2D2O95562 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFT2D2O95562 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFT2D2O95562 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SFT2D2O95562 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SFT2D2O95562 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SFT2D2O95562 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SFT2D2O95562 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.87■□□□□ 0.61
SFT2D2O95562 SMPD5-203ENST00000639008 1464 ntBASIC18.87■□□□□ 0.61
SFT2D2O95562 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFT2D2O95562 AL024507.2-201ENST00000606070 2574 ntBASIC18.87■□□□□ 0.61
SFT2D2O95562 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SFT2D2O95562 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SFT2D2O95562 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.86■□□□□ 0.61
SFT2D2O95562 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SFT2D2O95562 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SFT2D2O95562 AC242852.2-201ENST00000615738 1807 ntBASIC18.86■□□□□ 0.61
SFT2D2O95562 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SFT2D2O95562 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SFT2D2O95562 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.86■□□□□ 0.61
SFT2D2O95562 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SFT2D2O95562 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.86■□□□□ 0.61
SFT2D2O95562 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.86■□□□□ 0.61
SFT2D2O95562 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SFT2D2O95562 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SFT2D2O95562 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SFT2D2O95562 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SFT2D2O95562 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SFT2D2O95562 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SFT2D2O95562 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SFT2D2O95562 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SFT2D2O95562 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SFT2D2O95562 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SFT2D2O95562 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SFT2D2O95562 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.85■□□□□ 0.61
SFT2D2O95562 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.85■□□□□ 0.61
SFT2D2O95562 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.85■□□□□ 0.61
SFT2D2O95562 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SFT2D2O95562 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SFT2D2O95562 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
SFT2D2O95562 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SFT2D2O95562 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.85■□□□□ 0.61
SFT2D2O95562 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SFT2D2O95562 AL161729.1-201ENST00000604104 1402 ntBASIC18.84■□□□□ 0.61
SFT2D2O95562 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SFT2D2O95562 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SFT2D2O95562 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SFT2D2O95562 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SFT2D2O95562 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.84■□□□□ 0.61
SFT2D2O95562 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SFT2D2O95562 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SFT2D2O95562 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SFT2D2O95562 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SFT2D2O95562 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SFT2D2O95562 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SFT2D2O95562 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SFT2D2O95562 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SFT2D2O95562 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SFT2D2O95562 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.83■□□□□ 0.6
SFT2D2O95562 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.83■□□□□ 0.6
SFT2D2O95562 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SFT2D2O95562 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SFT2D2O95562 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.83■□□□□ 0.6
SFT2D2O95562 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SFT2D2O95562 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SFT2D2O95562 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SFT2D2O95562 KRT18P10-201ENST00000388836 1287 ntBASIC18.82■□□□□ 0.6
SFT2D2O95562 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.82■□□□□ 0.6
SFT2D2O95562 ESRRAP2-201ENST00000418437 1549 ntBASIC18.82■□□□□ 0.6
SFT2D2O95562 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.82■□□□□ 0.6
SFT2D2O95562 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SFT2D2O95562 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SFT2D2O95562 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SFT2D2O95562 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SFT2D2O95562 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SFT2D2O95562 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SFT2D2O95562 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D2O95562 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D2O95562 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SFT2D2O95562 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SFT2D2O95562 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D2O95562 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D2O95562 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D2O95562 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D2O95562 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms