Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM3O75382 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM3O75382 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM3O75382 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM3O75382 AC010997.5-201ENST00000609182 354 ntBASIC21.11■□□□□ 0.97
TRIM3O75382 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM3O75382 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM3O75382 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM3O75382 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM3O75382 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM3O75382 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRIM3O75382 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM3O75382 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM3O75382 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM3O75382 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM3O75382 MTDHP2-201ENST00000601468 714 ntBASIC21.1■□□□□ 0.97
TRIM3O75382 AC131212.1-201ENST00000613771 668 ntBASIC21.1■□□□□ 0.97
TRIM3O75382 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM3O75382 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM3O75382 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM3O75382 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM3O75382 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
TRIM3O75382 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM3O75382 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM3O75382 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM3O75382 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
TRIM3O75382 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM3O75382 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM3O75382 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM3O75382 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM3O75382 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM3O75382 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM3O75382 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM3O75382 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM3O75382 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM3O75382 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM3O75382 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM3O75382 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM3O75382 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM3O75382 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM3O75382 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM3O75382 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM3O75382 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM3O75382 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM3O75382 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM3O75382 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM3O75382 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM3O75382 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM3O75382 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM3O75382 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM3O75382 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM3O75382 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM3O75382 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM3O75382 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM3O75382 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM3O75382 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM3O75382 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM3O75382 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM3O75382 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRIM3O75382 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM3O75382 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM3O75382 AC004448.1-201ENST00000458332 883 ntBASIC21.06■□□□□ 0.96
TRIM3O75382 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM3O75382 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM3O75382 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TRIM3O75382 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM3O75382 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM3O75382 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM3O75382 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM3O75382 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM3O75382 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM3O75382 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM3O75382 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
TRIM3O75382 MIR6724-1-201ENST00000616420 92 ntBASIC21.05■□□□□ 0.96
TRIM3O75382 MIR6724-2-201ENST00000616483 92 ntBASIC21.05■□□□□ 0.96
TRIM3O75382 MIR6722-201ENST00000617286 78 ntBASIC21.05■□□□□ 0.96
TRIM3O75382 MIR6724-4-201ENST00000617390 92 ntBASIC21.05■□□□□ 0.96
TRIM3O75382 MIR6724-3-201ENST00000622482 92 ntBASIC21.05■□□□□ 0.96
TRIM3O75382 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM3O75382 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM3O75382 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM3O75382 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM3O75382 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM3O75382 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM3O75382 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM3O75382 AC131274.2-201ENST00000580697 1507 ntBASIC21.04■□□□□ 0.96
TRIM3O75382 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM3O75382 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRIM3O75382 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM3O75382 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM3O75382 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRIM3O75382 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM3O75382 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM3O75382 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM3O75382 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM3O75382 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM3O75382 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM3O75382 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM3O75382 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM3O75382 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms