Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.36■■□□□ 1.17
LRP4O75096 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRP4O75096 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.35■■□□□ 1.17
LRP4O75096 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.35■■□□□ 1.17
LRP4O75096 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRP4O75096 AC009102.2-201ENST00000606772 1639 ntBASIC22.35■■□□□ 1.17
LRP4O75096 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRP4O75096 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRP4O75096 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRP4O75096 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.35■■□□□ 1.17
LRP4O75096 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.34■■□□□ 1.17
LRP4O75096 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRP4O75096 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.34■■□□□ 1.17
LRP4O75096 DUX4L19-201ENST00000557448 1267 ntBASIC22.34■■□□□ 1.17
LRP4O75096 AL136162.1-201ENST00000607711 1078 ntBASIC22.34■■□□□ 1.17
LRP4O75096 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRP4O75096 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
LRP4O75096 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRP4O75096 AL161729.1-201ENST00000604104 1402 ntBASIC22.34■■□□□ 1.17
LRP4O75096 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRP4O75096 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRP4O75096 ZNRF2P3-201ENST00000424200 374 ntBASIC22.33■■□□□ 1.17
LRP4O75096 SRD5A1P1-201ENST00000442297 786 ntBASIC22.33■■□□□ 1.17
LRP4O75096 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
LRP4O75096 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRP4O75096 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LRP4O75096 AC006455.2-201ENST00000429931 906 ntBASIC22.33■■□□□ 1.16
LRP4O75096 AP001330.3-201ENST00000520123 633 ntBASIC22.33■■□□□ 1.16
LRP4O75096 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.33■■□□□ 1.16
LRP4O75096 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRP4O75096 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
LRP4O75096 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRP4O75096 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRP4O75096 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
LRP4O75096 PBX2P1-201ENST00000493219 1291 ntBASIC22.32■■□□□ 1.16
LRP4O75096 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRP4O75096 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRP4O75096 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRP4O75096 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
LRP4O75096 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRP4O75096 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRP4O75096 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRP4O75096 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRP4O75096 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRP4O75096 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRP4O75096 SERBP1P1-201ENST00000396021 1160 ntBASIC22.31■■□□□ 1.16
LRP4O75096 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRP4O75096 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRP4O75096 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRP4O75096 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.3■■□□□ 1.16
LRP4O75096 AC099791.2-201ENST00000605725 427 ntBASIC22.3■■□□□ 1.16
LRP4O75096 AC011298.3-201ENST00000615796 283 ntBASIC22.3■■□□□ 1.16
LRP4O75096 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRP4O75096 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRP4O75096 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRP4O75096 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
LRP4O75096 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRP4O75096 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRP4O75096 EDA-201ENST00000338901 1233 ntBASIC22.29■■□□□ 1.16
LRP4O75096 MIR935-201ENST00000401179 91 ntBASIC22.29■■□□□ 1.16
LRP4O75096 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.29■■□□□ 1.16
LRP4O75096 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRP4O75096 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRP4O75096 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
LRP4O75096 AC005837.3-201ENST00000612163 286 ntBASIC22.28■■□□□ 1.16
LRP4O75096 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRP4O75096 ALDH1A3-203ENST00000557963 1670 ntBASIC22.28■■□□□ 1.16
LRP4O75096 AC142381.3-201ENST00000568208 1670 ntBASIC22.28■■□□□ 1.16
LRP4O75096 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.28■■□□□ 1.16
LRP4O75096 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRP4O75096 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.28■■□□□ 1.16
LRP4O75096 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.27■■□□□ 1.16
LRP4O75096 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRP4O75096 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.27■■□□□ 1.16
LRP4O75096 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.27■■□□□ 1.16
LRP4O75096 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
LRP4O75096 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
LRP4O75096 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.27■■□□□ 1.16
LRP4O75096 AF213884.3-201ENST00000563833 479 ntBASIC22.27■■□□□ 1.16
LRP4O75096 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.27■■□□□ 1.16
LRP4O75096 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRP4O75096 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
LRP4O75096 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LRP4O75096 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
LRP4O75096 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRP4O75096 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.26■■□□□ 1.15
LRP4O75096 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.26■■□□□ 1.15
LRP4O75096 RARRES2P6-201ENST00000567333 442 ntBASIC22.26■■□□□ 1.15
LRP4O75096 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRP4O75096 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.26■■□□□ 1.15
LRP4O75096 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRP4O75096 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRP4O75096 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.25■■□□□ 1.15
LRP4O75096 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.25■■□□□ 1.15
LRP4O75096 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRP4O75096 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
LRP4O75096 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRP4O75096 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRP4O75096 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRP4O75096 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms