Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA12O60330 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGA12O60330 MIR6821-201ENST00000617625 74 ntBASIC22.57■■□□□ 1.2
PCDHGA12O60330 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA12O60330 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA12O60330 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PCDHGA12O60330 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA12O60330 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHGA12O60330 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA12O60330 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA12O60330 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PCDHGA12O60330 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA12O60330 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA12O60330 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHGA12O60330 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHGA12O60330 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA12O60330 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA12O60330 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA12O60330 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA12O60330 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA12O60330 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.55■■□□□ 1.2
PCDHGA12O60330 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA12O60330 MIR4767-201ENST00000582827 78 ntBASIC22.55■■□□□ 1.2
PCDHGA12O60330 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA12O60330 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA12O60330 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA12O60330 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA12O60330 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA12O60330 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA12O60330 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGA12O60330 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGA12O60330 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGA12O60330 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA12O60330 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA12O60330 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA12O60330 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGA12O60330 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA12O60330 RASA4CP-201ENST00000424092 1398 ntBASIC22.53■■□□□ 1.2
PCDHGA12O60330 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA12O60330 AC097381.1-201ENST00000429019 1296 ntBASIC22.53■■□□□ 1.2
PCDHGA12O60330 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGA12O60330 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA12O60330 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA12O60330 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA12O60330 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA12O60330 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA12O60330 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA12O60330 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDHGA12O60330 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHGA12O60330 AL138724.1-201ENST00000606771 1088 ntBASIC22.52■■□□□ 1.2
PCDHGA12O60330 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA12O60330 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGA12O60330 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA12O60330 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA12O60330 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHGA12O60330 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PCDHGA12O60330 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA12O60330 SERBP1P1-201ENST00000396021 1160 ntBASIC22.51■■□□□ 1.19
PCDHGA12O60330 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHGA12O60330 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHGA12O60330 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGA12O60330 CA15P2-201ENST00000611168 834 ntBASIC22.51■■□□□ 1.19
PCDHGA12O60330 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.51■■□□□ 1.19
PCDHGA12O60330 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA12O60330 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGA12O60330 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGA12O60330 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA12O60330 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA12O60330 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHGA12O60330 AC027682.1-201ENST00000562846 899 ntBASIC22.5■■□□□ 1.19
PCDHGA12O60330 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGA12O60330 AC011298.3-201ENST00000615796 283 ntBASIC22.5■■□□□ 1.19
PCDHGA12O60330 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGA12O60330 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA12O60330 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA12O60330 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA12O60330 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA12O60330 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA12O60330 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA12O60330 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHGA12O60330 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGA12O60330 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA12O60330 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
PCDHGA12O60330 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PCDHGA12O60330 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA12O60330 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGA12O60330 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.48■■□□□ 1.19
PCDHGA12O60330 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGA12O60330 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDHGA12O60330 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA12O60330 AC131274.2-201ENST00000580697 1507 ntBASIC22.47■■□□□ 1.19
PCDHGA12O60330 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHGA12O60330 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA12O60330 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA12O60330 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PCDHGA12O60330 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA12O60330 AC099791.2-201ENST00000605725 427 ntBASIC22.47■■□□□ 1.19
PCDHGA12O60330 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA12O60330 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA12O60330 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms