Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPM1DO15297 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPM1DO15297 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPM1DO15297 UNC93B3-201ENST00000308076 687 ntBASIC22.22■■□□□ 1.15
PPM1DO15297 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.22■■□□□ 1.15
PPM1DO15297 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.22■■□□□ 1.15
PPM1DO15297 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.22■■□□□ 1.15
PPM1DO15297 AL139125.2-201ENST00000623134 1869 ntBASIC22.22■■□□□ 1.15
PPM1DO15297 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PPM1DO15297 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPM1DO15297 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPM1DO15297 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPM1DO15297 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPM1DO15297 PBX2P1-201ENST00000493219 1291 ntBASIC22.21■■□□□ 1.15
PPM1DO15297 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PPM1DO15297 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.21■■□□□ 1.15
PPM1DO15297 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PPM1DO15297 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PPM1DO15297 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPM1DO15297 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PPM1DO15297 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.2■■□□□ 1.14
PPM1DO15297 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PPM1DO15297 AC133561.4-201ENST00000566112 224 ntBASIC22.2■■□□□ 1.14
PPM1DO15297 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.2■■□□□ 1.14
PPM1DO15297 AC106739.1-201ENST00000617035 715 ntBASIC22.2■■□□□ 1.14
PPM1DO15297 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPM1DO15297 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPM1DO15297 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.19■■□□□ 1.14
PPM1DO15297 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PPM1DO15297 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPM1DO15297 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PPM1DO15297 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PPM1DO15297 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PPM1DO15297 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPM1DO15297 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PPM1DO15297 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.19■■□□□ 1.14
PPM1DO15297 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
PPM1DO15297 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPM1DO15297 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPM1DO15297 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.18■■□□□ 1.14
PPM1DO15297 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPM1DO15297 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.18■■□□□ 1.14
PPM1DO15297 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PPM1DO15297 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PPM1DO15297 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.17■■□□□ 1.14
PPM1DO15297 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.17■■□□□ 1.14
PPM1DO15297 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPM1DO15297 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.17■■□□□ 1.14
PPM1DO15297 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.17■■□□□ 1.14
PPM1DO15297 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPM1DO15297 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPM1DO15297 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPM1DO15297 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.17■■□□□ 1.14
PPM1DO15297 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.17■■□□□ 1.14
PPM1DO15297 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPM1DO15297 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.16■■□□□ 1.14
PPM1DO15297 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPM1DO15297 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.16■■□□□ 1.14
PPM1DO15297 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPM1DO15297 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPM1DO15297 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPM1DO15297 MIR935-201ENST00000401179 91 ntBASIC22.16■■□□□ 1.14
PPM1DO15297 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.16■■□□□ 1.14
PPM1DO15297 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.16■■□□□ 1.14
PPM1DO15297 AL136162.1-201ENST00000607711 1078 ntBASIC22.16■■□□□ 1.14
PPM1DO15297 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPM1DO15297 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.16■■□□□ 1.14
PPM1DO15297 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPM1DO15297 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPM1DO15297 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPM1DO15297 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PPM1DO15297 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PPM1DO15297 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
PPM1DO15297 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPM1DO15297 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPM1DO15297 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPM1DO15297 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
PPM1DO15297 LINC01124-201ENST00000409786 2117 ntBASIC22.14■■□□□ 1.13
PPM1DO15297 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.14■■□□□ 1.13
PPM1DO15297 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PPM1DO15297 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.14■■□□□ 1.13
PPM1DO15297 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPM1DO15297 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPM1DO15297 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPM1DO15297 AC009102.2-201ENST00000606772 1639 ntBASIC22.13■■□□□ 1.13
PPM1DO15297 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPM1DO15297 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPM1DO15297 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.13■■□□□ 1.13
PPM1DO15297 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPM1DO15297 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.13■■□□□ 1.13
PPM1DO15297 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPM1DO15297 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.13■■□□□ 1.13
PPM1DO15297 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.13■■□□□ 1.13
PPM1DO15297 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.13■■□□□ 1.13
PPM1DO15297 AL161729.1-201ENST00000604104 1402 ntBASIC22.13■■□□□ 1.13
PPM1DO15297 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PPM1DO15297 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PPM1DO15297 AC135279.3-201ENST00000610945 1311 ntBASIC22.12■■□□□ 1.13
PPM1DO15297 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PPM1DO15297 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms