Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 AC009831.1-201ENST00000580420 1582 ntBASIC21.03■□□□□ 0.96
TNFRSF11BO00300 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 AC133552.2-201ENST00000619106 1032 ntBASIC21.03■□□□□ 0.96
TNFRSF11BO00300 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TNFRSF11BO00300 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 RPS2P7-201ENST00000447334 885 ntBASIC21.02■□□□□ 0.96
TNFRSF11BO00300 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF11BO00300 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.02■□□□□ 0.95
TNFRSF11BO00300 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 GPX1-201ENST00000419349 1106 ntBASIC21.01■□□□□ 0.95
TNFRSF11BO00300 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFRSF11BO00300 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TNFRSF11BO00300 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21■□□□□ 0.95
TNFRSF11BO00300 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF11BO00300 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFRSF11BO00300 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
TNFRSF11BO00300 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF11BO00300 AL592295.1-201ENST00000400984 884 ntBASIC20.99■□□□□ 0.95
TNFRSF11BO00300 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFRSF11BO00300 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFRSF11BO00300 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF11BO00300 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF11BO00300 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF11BO00300 LINC00565-201ENST00000562710 2331 ntBASIC20.98■□□□□ 0.95
TNFRSF11BO00300 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF11BO00300 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF11BO00300 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF11BO00300 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.97■□□□□ 0.95
TNFRSF11BO00300 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF11BO00300 AC018755.3-202ENST00000596210 929 ntBASIC20.97■□□□□ 0.95
TNFRSF11BO00300 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF11BO00300 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF11BO00300 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF11BO00300 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF11BO00300 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms