Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPB1O00241 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SIRPB1O00241 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SIRPB1O00241 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.19■□□□□ 0.66
SIRPB1O00241 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.19■□□□□ 0.66
SIRPB1O00241 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.19■□□□□ 0.66
SIRPB1O00241 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SIRPB1O00241 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.19■□□□□ 0.66
SIRPB1O00241 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIRPB1O00241 AF131216.4-201ENST00000638924 1588 ntBASIC19.19■□□□□ 0.66
SIRPB1O00241 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPB1O00241 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.18■□□□□ 0.66
SIRPB1O00241 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.18■□□□□ 0.66
SIRPB1O00241 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.18■□□□□ 0.66
SIRPB1O00241 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SIRPB1O00241 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.18■□□□□ 0.66
SIRPB1O00241 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPB1O00241 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.18■□□□□ 0.66
SIRPB1O00241 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SIRPB1O00241 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.17■□□□□ 0.66
SIRPB1O00241 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.17■□□□□ 0.66
SIRPB1O00241 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 DUSP8P5-201ENST00000422884 1815 ntBASIC19.17■□□□□ 0.66
SIRPB1O00241 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.17■□□□□ 0.66
SIRPB1O00241 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.17■□□□□ 0.66
SIRPB1O00241 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SIRPB1O00241 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPB1O00241 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.17■□□□□ 0.66
SIRPB1O00241 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPB1O00241 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.16■□□□□ 0.66
SIRPB1O00241 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPB1O00241 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPB1O00241 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.16■□□□□ 0.66
SIRPB1O00241 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SIRPB1O00241 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPB1O00241 AC103724.3-201ENST00000564481 992 ntBASIC19.16■□□□□ 0.66
SIRPB1O00241 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.16■□□□□ 0.66
SIRPB1O00241 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.16■□□□□ 0.66
SIRPB1O00241 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPB1O00241 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPB1O00241 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPB1O00241 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SIRPB1O00241 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPB1O00241 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPB1O00241 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SIRPB1O00241 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SIRPB1O00241 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SIRPB1O00241 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPB1O00241 ALDH1A3-203ENST00000557963 1670 ntBASIC19.14■□□□□ 0.66
SIRPB1O00241 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.14■□□□□ 0.66
SIRPB1O00241 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SIRPB1O00241 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPB1O00241 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPB1O00241 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.14■□□□□ 0.65
SIRPB1O00241 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SIRPB1O00241 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPB1O00241 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SIRPB1O00241 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPB1O00241 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPB1O00241 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPB1O00241 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SIRPB1O00241 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.13■□□□□ 0.65
SIRPB1O00241 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.13■□□□□ 0.65
SIRPB1O00241 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
SIRPB1O00241 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIRPB1O00241 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SIRPB1O00241 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.12■□□□□ 0.65
SIRPB1O00241 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SIRPB1O00241 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms