Protein–RNA interactions for Protein: O00213

APBB1, Amyloid-beta A4 precursor protein-binding family B member 1, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB1O00213 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
APBB1O00213 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
APBB1O00213 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
APBB1O00213 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.32■■■□□ 2.12
APBB1O00213 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
APBB1O00213 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
APBB1O00213 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
APBB1O00213 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
APBB1O00213 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
APBB1O00213 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
APBB1O00213 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.32■■■□□ 2.12
APBB1O00213 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
APBB1O00213 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
APBB1O00213 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.32■■■□□ 2.12
APBB1O00213 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
APBB1O00213 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.32■■■□□ 2.12
APBB1O00213 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.32■■■□□ 2.12
APBB1O00213 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
APBB1O00213 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
APBB1O00213 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
APBB1O00213 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
APBB1O00213 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
APBB1O00213 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
APBB1O00213 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
APBB1O00213 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.31■■■□□ 2.12
APBB1O00213 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
APBB1O00213 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.31■■■□□ 2.12
APBB1O00213 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.31■■■□□ 2.12
APBB1O00213 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.31■■■□□ 2.12
APBB1O00213 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
APBB1O00213 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
APBB1O00213 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
APBB1O00213 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
APBB1O00213 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.3■■■□□ 2.12
APBB1O00213 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.3■■■□□ 2.12
APBB1O00213 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
APBB1O00213 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
APBB1O00213 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.3■■■□□ 2.12
APBB1O00213 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.3■■■□□ 2.12
APBB1O00213 ALDH1A3-203ENST00000557963 1670 ntBASIC28.29■■■□□ 2.12
APBB1O00213 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
APBB1O00213 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
APBB1O00213 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
APBB1O00213 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.29■■■□□ 2.12
APBB1O00213 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
APBB1O00213 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.29■■■□□ 2.12
APBB1O00213 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.29■■■□□ 2.12
APBB1O00213 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
APBB1O00213 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.29■■■□□ 2.12
APBB1O00213 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
APBB1O00213 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.28■■■□□ 2.12
APBB1O00213 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.28■■■□□ 2.12
APBB1O00213 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
APBB1O00213 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.28■■■□□ 2.12
APBB1O00213 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.28■■■□□ 2.12
APBB1O00213 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
APBB1O00213 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.28■■■□□ 2.12
APBB1O00213 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.28■■■□□ 2.12
APBB1O00213 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
APBB1O00213 AL161729.1-201ENST00000604104 1402 ntBASIC28.27■■■□□ 2.12
APBB1O00213 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
APBB1O00213 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.27■■■□□ 2.12
APBB1O00213 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.27■■■□□ 2.12
APBB1O00213 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.27■■■□□ 2.12
APBB1O00213 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
APBB1O00213 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
APBB1O00213 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
APBB1O00213 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
APBB1O00213 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.26■■■□□ 2.11
APBB1O00213 UNC93B8-201ENST00000511903 705 ntBASIC28.26■■■□□ 2.11
APBB1O00213 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
APBB1O00213 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
APBB1O00213 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
APBB1O00213 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
APBB1O00213 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
APBB1O00213 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
APBB1O00213 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
APBB1O00213 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
APBB1O00213 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
APBB1O00213 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
APBB1O00213 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
APBB1O00213 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.24■■■□□ 2.11
APBB1O00213 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.24■■■□□ 2.11
APBB1O00213 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
APBB1O00213 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
APBB1O00213 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
APBB1O00213 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
APBB1O00213 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
APBB1O00213 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
APBB1O00213 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.23■■■□□ 2.11
APBB1O00213 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.23■■■□□ 2.11
APBB1O00213 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms