Protein–RNA interactions for Protein: H3BV60

TGFBR3L, Transforming growth factor-beta receptor type 3-like protein, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3LH3BV60 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TGFBR3LH3BV60 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 AC005703.6-201ENST00000623265 1329 ntBASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TGFBR3LH3BV60 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 MIR3621-201ENST00000580529 85 ntBASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFBR3LH3BV60 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TGFBR3LH3BV60 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TGFBR3LH3BV60 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.33■■□□□ 1.01
TGFBR3LH3BV60 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.33■■□□□ 1.01
TGFBR3LH3BV60 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TGFBR3LH3BV60 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.33■■□□□ 1.01
TGFBR3LH3BV60 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TGFBR3LH3BV60 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TGFBR3LH3BV60 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.33■■□□□ 1
TGFBR3LH3BV60 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.33■■□□□ 1
TGFBR3LH3BV60 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TGFBR3LH3BV60 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.33■■□□□ 1
TGFBR3LH3BV60 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.32■■□□□ 1
TGFBR3LH3BV60 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.32■■□□□ 1
TGFBR3LH3BV60 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TGFBR3LH3BV60 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.32■■□□□ 1
TGFBR3LH3BV60 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.32■■□□□ 1
TGFBR3LH3BV60 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TGFBR3LH3BV60 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TGFBR3LH3BV60 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TGFBR3LH3BV60 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TGFBR3LH3BV60 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TGFBR3LH3BV60 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.31■■□□□ 1
TGFBR3LH3BV60 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.31■■□□□ 1
TGFBR3LH3BV60 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.31■■□□□ 1
TGFBR3LH3BV60 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.31■■□□□ 1
TGFBR3LH3BV60 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.31■■□□□ 1
TGFBR3LH3BV60 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.31■■□□□ 1
TGFBR3LH3BV60 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.31■■□□□ 1
TGFBR3LH3BV60 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.31■■□□□ 1
TGFBR3LH3BV60 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TGFBR3LH3BV60 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TGFBR3LH3BV60 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TGFBR3LH3BV60 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.31■■□□□ 1
TGFBR3LH3BV60 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TGFBR3LH3BV60 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TGFBR3LH3BV60 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.3■■□□□ 1
TGFBR3LH3BV60 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.3■■□□□ 1
TGFBR3LH3BV60 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TGFBR3LH3BV60 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.3■■□□□ 1
TGFBR3LH3BV60 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.3■■□□□ 1
TGFBR3LH3BV60 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.3■■□□□ 1
TGFBR3LH3BV60 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TGFBR3LH3BV60 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TGFBR3LH3BV60 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TGFBR3LH3BV60 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TGFBR3LH3BV60 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TGFBR3LH3BV60 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TGFBR3LH3BV60 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TGFBR3LH3BV60 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TGFBR3LH3BV60 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.29■■□□□ 1
TGFBR3LH3BV60 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.28■■□□□ 1
TGFBR3LH3BV60 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TGFBR3LH3BV60 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.28■■□□□ 1
TGFBR3LH3BV60 AL512631.2-201ENST00000604634 923 ntBASIC21.28■■□□□ 1
TGFBR3LH3BV60 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TGFBR3LH3BV60 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TGFBR3LH3BV60 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TGFBR3LH3BV60 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TGFBR3LH3BV60 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.27■■□□□ 1
TGFBR3LH3BV60 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.27■■□□□ 1
TGFBR3LH3BV60 AC131281.2-201ENST00000520478 145 ntBASIC21.27■■□□□ 1
TGFBR3LH3BV60 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.27■■□□□ 1
TGFBR3LH3BV60 AL356740.2-201ENST00000601559 647 ntBASIC21.27■■□□□ 1
TGFBR3LH3BV60 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.27■■□□□ 1
TGFBR3LH3BV60 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TGFBR3LH3BV60 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms