Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01548A6NM66 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01548A6NM66 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01548A6NM66 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01548A6NM66 ALDH1A3-203ENST00000557963 1670 ntBASIC18.02■□□□□ 0.47
LINC01548A6NM66 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01548A6NM66 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01548A6NM66 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.02■□□□□ 0.47
LINC01548A6NM66 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01548A6NM66 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01548A6NM66 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01548A6NM66 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01548A6NM66 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01548A6NM66 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01548A6NM66 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01548A6NM66 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01548A6NM66 AC005703.6-201ENST00000623265 1329 ntBASIC18■□□□□ 0.47
LINC01548A6NM66 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01548A6NM66 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01548A6NM66 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01548A6NM66 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18■□□□□ 0.47
LINC01548A6NM66 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18■□□□□ 0.47
LINC01548A6NM66 SRR-208ENST00000576848 588 ntTSL 4 BASIC18■□□□□ 0.47
LINC01548A6NM66 MIR3621-201ENST00000580529 85 ntBASIC18■□□□□ 0.47
LINC01548A6NM66 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01548A6NM66 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18■□□□□ 0.47
LINC01548A6NM66 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01548A6NM66 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18■□□□□ 0.47
LINC01548A6NM66 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01548A6NM66 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01548A6NM66 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01548A6NM66 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01548A6NM66 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01548A6NM66 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01548A6NM66 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01548A6NM66 AL356740.2-201ENST00000601559 647 ntBASIC17.99■□□□□ 0.47
LINC01548A6NM66 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01548A6NM66 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01548A6NM66 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01548A6NM66 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01548A6NM66 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01548A6NM66 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01548A6NM66 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01548A6NM66 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01548A6NM66 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01548A6NM66 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01548A6NM66 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.98■□□□□ 0.47
LINC01548A6NM66 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01548A6NM66 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01548A6NM66 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01548A6NM66 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
LINC01548A6NM66 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LINC01548A6NM66 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC01548A6NM66 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC01548A6NM66 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC01548A6NM66 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01548A6NM66 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01548A6NM66 AC093323.1-202ENST00000635031 2045 ntBASIC17.96■□□□□ 0.47
LINC01548A6NM66 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01548A6NM66 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01548A6NM66 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LINC01548A6NM66 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.96■□□□□ 0.47
LINC01548A6NM66 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.96■□□□□ 0.47
LINC01548A6NM66 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.96■□□□□ 0.47
LINC01548A6NM66 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.96■□□□□ 0.47
LINC01548A6NM66 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01548A6NM66 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01548A6NM66 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LINC01548A6NM66 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01548A6NM66 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01548A6NM66 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01548A6NM66 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LINC01548A6NM66 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms